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@FrancisCrickInstitute

The Francis Crick Institute

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  1. Etch-a-Cell-Nuclear-Envelope Etch-a-Cell-Nuclear-Envelope Public

    Python 8 1

  2. TRACERx-PHLEX TRACERx-PHLEX Public

    Modular pipeline for integrated analysis of the tumour microenvironment using multiplex imaging

    Shell 8

  3. OmeSliCC OmeSliCC Public

    Ome(ro) SLide Image Conversion and Compression pipline (OmeSliCC)

    Python 7 1

  4. ActiveUnetSegmentation ActiveUnetSegmentation Public

    Unet implementation to work with active contours for segmentations. Using keras and tensorflow 1.15 or 2.5.

    Python 5

  5. warpAnnotations warpAnnotations Public

    A tool to transform annotations (such as points, skeletons or meshes) between spatial datasets.

    MATLAB 5

  6. cbias-napari cbias-napari Public

    Introduction to Napari training course

    Jupyter Notebook 5 1

Repositories

Showing 10 of 123 repositories
  • FrancisCrickInstitute/multi-dimensional-imaging-and-analysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 17, 2024
  • Segment-Flow Public

    Nextflow pipeline for deep learning segmentation models

    FrancisCrickInstitute/Segment-Flow’s past year of commit activity
    Python 2 1 0 0 Updated Aug 16, 2024
  • image-analysis-outreach Public

    A collection of materials and information for school outreach sessions about image analysis

    FrancisCrickInstitute/image-analysis-outreach’s past year of commit activity
    2 GPL-3.0 0 0 0 Updated Aug 15, 2024
  • chronogram Public

    cast and annotate metadata, laboratory & clinical data

    FrancisCrickInstitute/chronogram’s past year of commit activity
    R 0 0 0 0 Updated Aug 14, 2024
  • sparks Public
    FrancisCrickInstitute/sparks’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Aug 13, 2024
  • sparks-ai Public template
    FrancisCrickInstitute/sparks-ai’s past year of commit activity
    HTML 0 0 0 0 Updated Aug 9, 2024
  • FrancisCrickInstitute/python-decon’s past year of commit activity
    Python 0 0 0 0 Updated Aug 7, 2024
  • CALM Public

    Crick Advanced Light Microscopy

    FrancisCrickInstitute/CALM’s past year of commit activity
    Jupyter Notebook 0 CC-BY-SA-4.0 1 4 0 Updated Aug 7, 2024
  • rgb-colour-slider Public Forked from xdl/rgb-colour-slider

    Colour slider activity to teach how RGB colours combine

    FrancisCrickInstitute/rgb-colour-slider’s past year of commit activity
    HTML 0 1 0 0 Updated Aug 5, 2024
  • AIoD-Model-Registry Public

    The core registry for all AI models available on AI on Demand

    FrancisCrickInstitute/AIoD-Model-Registry’s past year of commit activity
    Python 0 0 2 0 Updated Jul 30, 2024