Merge pull request #1 from maxulysse/WackerO_single

no join_germline by default
FriederikeHanssen · Jun 30, 2022 · d59906e · d59906e
2 parents 998a8ee + 912d9bc
commit d59906e
Showing 1 changed file with 0 additions and 3 deletions.
diff --git a/conf/test.config b/conf/test.config
@@ -107,7 +107,6 @@ profiles {
         params.intervals           = params.test_data['homo_sapiens']['genome']['genome_21_multi_interval_bed']
         params.pon                 = params.test_data['homo_sapiens']['genome']['mills_and_1000g_indels_21_vcf_gz']
         params.step                = 'variant_calling'
-        params.joint_germline      = true
         params.wes                 = true
 
         params.nucleotides_per_second = 20
@@ -131,7 +130,6 @@ profiles {
         params.intervals           = params.test_data['homo_sapiens']['genome']['genome_21_multi_interval_bed']
         params.pon                 = params.test_data['homo_sapiens']['genome']['mills_and_1000g_indels_21_vcf_gz']
         params.step                = 'variant_calling'
-        params.joint_germline      = true
         params.wes                 = true
 
         params.nucleotides_per_second = 20
@@ -145,7 +143,6 @@ profiles {
         params.intervals           = params.test_data['homo_sapiens']['genome']['genome_21_multi_interval_bed']
         params.pon                 = params.test_data['homo_sapiens']['genome']['mills_and_1000g_indels_21_vcf_gz']
         params.step                = 'variant_calling'
-        params.joint_germline      = true
         params.wes                 = true
 
         params.nucleotides_per_second = 20