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Snake case variables (PR 1 of several) #98

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merged 4 commits into from
Apr 26, 2024

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@shimwell shimwell commented Apr 26, 2024

I've been going through the files changing the variables to all be snake case to follow PEP8 guidlines

https://peps.python.org/pep-0008/#function-and-variable-names

I've done five files and plan to carry on with more later, but I think this PR can go ahead as a separate PR

Splitting the PR up as it is already a large diff

Apologies I snuck in a small change to the README.md by adding the badge for the python package action. The action badge should go green when we create the next release

@psauvan psauvan merged commit 35c8210 into GEOUNED-org:dev Apr 26, 2024
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psauvan added a commit that referenced this pull request May 16, 2024
* Add a github workflow that prevents PRs to main that is not comming from dev (#92)

* Fix to position of additional cylindrical surface used to limit torus extent (#96)

* camel case for all classes (#95)

* camel case for all classes

* corrected file imports for georeverse

* Apply suggestions from code review

variable back to snake case

* variable back to snake case

* back to snake case

* back to previous var name

* Snake case variables (PR 1 of several) (#98)

* snake case for CellDefinitions file, tests pass

* vars in snake_case 2 more files

* working still

* using is to compare with bool (#99)

* Add comments to Geometry.py and booleanFunction.py files (#101)

* Add comments to Geometry_GU.py

* Add comments to booleanFunction.py

* Add comments to Geometry_GU.py

* Specific imports instead of wild card (#100)

* improved import statements flake8 hints

* removed extra line

* solve issue #75 in getTransMatrix function (#103)

* Changes in users initialization (#102)

* Add a github workflow that prevents PRs to main that is not comming from dev (#92) (#93)

* Add scripting interface

Change to allow setting users parameters by either config file or geouned set method

* minor fix

* Changes in geounedClassCall.py

---------

Co-authored-by: AlvaroCubi <[email protected]>

* Adding formatter to CI to keep code in PEP8 (#104)

* added format checker

* run black . locally

* f strings instead of .format (#106)

* replaced all .format with f strings

* corrected f string conversion

* Snake case variables (PR 2 of several)  (#105)

* snake case im more varibles

* formatting

---------

Co-authored-by: Patrick Sauvan <[email protected]>

* Quicker tests for ci (#109)

* removing slowest two geometries

* removing slow files from CI

* format

* added draft template (#97)

* Removing unused code (#107)

@psauvan comment has been taken into account. Unreachable code that was there for future consideration has been changed to comments.

* if statement includes False so never runs code

* if statement includes True so always run and never reaches else

* line after return never reached

* unused arg

* unused arg

* unused arg calling function

* commented unused code as requested

* formatting

* format

* Testing writing inputs for more MC codes (#108)

* also writting openmc python, phits and serpent files

* formatting

* decreased lcoal run time and added all outFormats

* black using same version as in pyproject

* py3.11 in formatting ci

* matched exactly black versions

* simpler black pinning

* format

* Snake case functions (#115)

* converted more functions

* more snake case functions

* more snake case function names

* more snake case functions

* more snake case functions

* more snake case functions

* formatting

* formatting

* formatting

* formatting

* converting function names to snake class

* duplicate import openmc (#116)

* Sphinx based docs with CI action to build and hosted on gh-pages (#119)

* started rtd

* testing docs action

* update pip

* corrected python version

* added s to docs

* publish every time

* added static folder

* skipping ci for non code files

* changed to rerad the docs theme

* started install section

* added more sections

* added api class

* docs ci using conda

* added -y for freecad

* trying py 3.12

* mimic working conda ci

* using rst so no markdown convertion needed

* added github edit link

* removed path prints

* added readme link, badge

* format

* Add issue templates  (#112)

* Add a github workflow that prevents PRs to main that is not comming from dev (#92) (#93)

* Create feature request template

* improve documentation template

* update feature request template

---------

Co-authored-by: AlvaroCubi <[email protected]>

* Trigger docs build on push only (#126)

* pushing triggers doics build

* added if push

* added missing = sign (#130)

* added missing package (#135)

* replaced print statements with log (#133)

* replaced print statements with log

* added logger

* formatting

* removed encoding arg

* removed verbose as all gets logged

* removed unused logger

* removed , from logging cmd

* sorted imports

* added another tqdm loop

* isort

* format

* Fixing logger commands (#137)

* fixed multi comma log statements

* capital letters for progress bar sections

* formatted

* removal of Options as global variable (#138)

* instances of Options class passed by arg

* updated usage to show how to use Options

* format pep8

* added missing options arg

* added missing args options

* passing in options as arg

* bug fix for compsolid

* format

* removal of Tolerances as global variable  (#139)

* passing tolerance as arg not global var

* added tolerance example to usage section

* one set of argument names

* moved atr and types getting out of loop

* format

* passing missing options and tolerances

* format

* found bug hidden in try: except statement

* using tolerance for more local varibles

* formatting

* Numerical format to normal class (#141)

* replaced global with class passed by arg

* format

* Improving docs install section (#145)

* added dev install instructions

* added method section

* testing the setting of all class arguments (#147)

* Adding getters setters type checking to Options, Tolerances, NumericFormat class (#148)

* added type ching setters

* added low limit checking for reals

* format

* added type checkers for Tolerances

* format

* Add settings class (#149)

* settings being passed through the code

* all the attributes show in usage example

* Adding export csg method (#150)

* added export csg method

* format

* leaving comments in tests

* Adding support for json config file (#152)

* testing from json

* returned file to pre PR status

* returned file to init

* returned file to init

* temp fixing for serpent universe, issue raised

* making use of stp file already on repo

* Adding command line tool including documentation and testing (#155)

* split usage into two sections

* added minimal config from cli example to ci

* improved cli docs

* format

* removed duplication between readme and docs (#156)

* Moving code from __init__ file to core.py (#157)

* moved core logic from init

* format

* Fixing issue 154 (#158)

* added test that currently fails

* fixed bug with freecad attribute usage

* added missing arg

* format

* added missing args bug (#159)

* added missing args

* format

* added description of solid being decomposed (#161)

* Context managers for writing try 2 (#160)

* Add a github workflow that prevents PRs to main that is not comming from dev (#92) (#93)

* using context managers to write files

* review comments 4/5

---------

Co-authored-by: AlvaroCubi <[email protected]>

* Creating folder if needed (#162)

* added tests to check writing to folder

* back to org

* back to org

* back to org

* creating output folder prior to writing

* isort on the imports

* format

* setting line length to 128 (#163)

* Lower case folder names and files (#165)

* renamed subfolders to lowercase

* renamed files to lower case

* openmc_py and openmc_xml lower case (#166)

* openmc_py and openmc_xml lower case

* removed outdated code comment

* Added type checking on export csg (#167)

* added input checking on export_csg

* compacted same types

* Update src/geouned/GEOUNED/core.py

---------

Co-authored-by: Patrick Sauvan <[email protected]>

* Adding windows install instructions (#169)

* added windows install instructions

* improved install instructions

---------

Co-authored-by: teade <[email protected]>
Co-authored-by: Jonathan Shimwell <[email protected]>
Co-authored-by: Jonathan Shimwell <[email protected]>
Co-authored-by: Patrick Sauvan <[email protected]>
Co-authored-by: alberto743 <[email protected]>
Co-authored-by: Alex Valentine <[email protected]>
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2 participants