Update README.md

Fixing parts of #901
Gaius-Augustus · Dec 19, 2024 · 075383e · 075383e
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diff --git a/README.md b/README.md
@@ -335,14 +335,10 @@ Subsequently install BRAKER and other software "as usual" while being in your co
 
 BRAKER is a collection of Perl and Python scripts and a Perl module. The main script that will be called in order to run BRAKER is `braker.pl`. Additional Perl and Python components are:
 
--   `align2hints.pl`
-
 -   `filterGenemark.pl`
 
 -   `filterIntronsFindStrand.pl`
 
--   `startAlign.pl`
-
 -   `helpMod_braker.pm`
 
 -   `findGenesInIntrons.pl`