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@GenomePhone

GenomePhone

README.adoc

GenomePhone

License: MIT Kotlin 1.9 Python 3.11 FastAPI Kubernetes Apache Kafka EdgeDB Terraform

Overview

Variant calling is a process in bioinformatics that identifies differences in a genomic sequence compared to a reference sequence. These differences, or variants, can include single nucleotide polymorphisms (SNPs), insertions, deletions, and others. Variant calling plays a crucial role in understanding the genetic basis of diseases, among other applications.

GenomePhone is a framework for distributed variant calling.

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  1. genomephone-core genomephone-core Public

    GenomePhone's main configuration

  2. genomephone-frontend genomephone-frontend Public

    The frontend for genomephone

    Python

  3. genomephone-worker-varscan genomephone-worker-varscan Public

    VarScan implementation of a genomephone worker

    Kotlin

Repositories

Showing 4 of 4 repositories
  • .github Public
    GenomePhone/.github’s past year of commit activity
    0 MIT 0 0 0 Updated Jul 31, 2023
  • genomephone-core Public

    GenomePhone's main configuration

    GenomePhone/genomephone-core’s past year of commit activity
    0 MIT 0 0 0 Updated Jul 31, 2023
  • genomephone-frontend Public

    The frontend for genomephone

    GenomePhone/genomephone-frontend’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Jul 31, 2023
  • genomephone-worker-varscan Public

    VarScan implementation of a genomephone worker

    GenomePhone/genomephone-worker-varscan’s past year of commit activity
    Kotlin 0 MIT 0 1 0 Updated Jul 31, 2023

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