Skip to content

upgrade to jupyterlab > 4 #111

upgrade to jupyterlab > 4

upgrade to jupyterlab > 4 #111

---
name: Integration Test
on:
pull_request:
branches:
- develop
paths:
- '.github/workflows/integration-test.yml'
- 'docker/**'
push:
branches:
- develop
paths:
- '.github/workflows/integration-test.yml'
- 'docker/**'
release:
types: [published]
permissions:
id-token: write
contents: read
pull-requests: write # Required for Sandbox image packages comment bot
jobs:
integration-test:
runs-on: ubuntu-latest
steps:
- name: git checkout dea-sandbox
uses: actions/checkout@v3
with:
path: dea-sandbox
- name: git checkout dea-notebooks
uses: actions/checkout@v3
with:
repository: GeoscienceAustralia/dea-notebooks
path: dea-notebooks
ref: stable
- name: Configure AWS credentials
uses: aws-actions/configure-aws-credentials@v1
with:
role-to-assume: arn:aws:iam::538673716275:role/github-actions-role-readonly
aws-region: ap-southeast-2
- name: Copy tide modelling files with the AWS CLI
run: |
aws s3 sync s3://dea-non-public-data/tide_models/tide_models/fes2014 tide_models/fes2014
aws s3 sync s3://dea-non-public-data/tide_models/tide_models/hamtide tide_models/hamtide
- name: Start docker compose
run: |
sudo chown -R 1000:100 ./dea-notebooks
cd ./dea-sandbox/integration-testing
CURRENT_UID=1000:100 docker compose up -d
- name: Extract package versions
run: |
cd ./dea-sandbox/integration-testing
docker compose exec -T sandbox cat /tmp/requirements.txt > requirements.txt
- name: Read package versions
id: versions
run: |
{
echo 'content<<EOF'
cat ./dea-sandbox/integration-testing/requirements.txt
echo EOF
} >> "$GITHUB_OUTPUT"
# Post package versions as a comment on the PR
- name: Post package versions as a comment
uses: mshick/add-pr-comment@v2
if: github.event_name == 'pull_request'
with:
message: |
### Installed packages:
```
${{ steps.versions.outputs.content }}
```
- name: Set up Datacube and Test
run: |
cd ./dea-sandbox/integration-testing
docker compose exec -T sandbox ./dea-notebooks/Tests/setup_test_datacube.sh
docker compose exec -T sandbox ./dea-notebooks/Tests/test_notebooks.sh