Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

add ci #195

Merged
merged 19 commits into from
Nov 24, 2023
Merged

add ci #195

merged 19 commits into from
Nov 24, 2023

Conversation

yuukiiwa
Copy link
Collaborator

@yuukiiwa yuukiiwa commented Nov 21, 2023

Added a pytest unit test to test whether a modified version of xpore diffmod is outputting similar results to the original xpore diffmod

@yuukiiwa yuukiiwa changed the title Add ci add ci Nov 22, 2023
@yuukiiwa yuukiiwa changed the base branch from master to dev November 22, 2023 08:08

assert(np.all(original_diffmod_table["id"] == test_diffmod_table["id"]))
assert(np.allclose(original_diffmod_table["diff_mod_rate_KO_vs_WT"], test_diffmod_table["diff_mod_rate_KO_vs_WT"]))
assert(np.allclose(original_diffmod_table["z_score_KO_vs_WT"], test_diffmod_table["z_score_KO_vs_WT"]))
Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

define how similar the two are

@yuukiiwa yuukiiwa merged commit b3d402d into dev Nov 24, 2023
1 check passed
@yuukiiwa yuukiiwa deleted the add_ci branch November 24, 2023 05:14
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant