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@HMS-IAC

Image Analysis Collaboratory

README.md

Welcome

Welcome to the repository of the Image Analysis Collaboratoy at Harvard Medical School.
Here, you will find code, teaching material, and documentation for public projects.
Please navigate to the list of repositories to see what is available.

Popular repositories Loading

  1. qupath-workshop qupath-workshop Public

    Materials supporting the QuPath workshop at Harvard Medical School.

    3 1

  2. .github .github Public

    About

    2

  3. Bioimage-Analysis-on-O2 Bioimage-Analysis-on-O2 Public

    Documentation page

    HTML 2

  4. BIA-QC BIA-QC Public

    Forked from rkarmaka/BIA-QC

    Quality control for bioimage analysis

    Python 1

  5. stroma-spatial-analysis-web stroma-spatial-analysis-web Public

    Jupyter Notebook 1 1

  6. stroma-spatial-analysis stroma-spatial-analysis Public

    An image analysis pipeline for quantifying the spatial distribution of cell markers in stroma-rich tumors

    Jupyter Notebook 1

Repositories

Showing 10 of 18 repositories
  • NoRI Public
    HMS-IAC/NoRI’s past year of commit activity
    Python 0 1 0 0 Updated May 19, 2025
  • bobiac Public

    Teaching materials for Boston Bioimage Analysis Course (BoBiAC).

    HMS-IAC/bobiac’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 13, 2025
  • bobiac-juv-notebook Public

    Teaching materials for Boston Bioimage Analysis Course (BoBiAC).

    HMS-IAC/bobiac-juv-notebook’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated May 12, 2025
  • stroma-spatial-analysis-web Public
    HMS-IAC/stroma-spatial-analysis-web’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated May 12, 2025
  • diffusion_microscopy Public

    Diffusion models for microscopy image generation

    HMS-IAC/diffusion_microscopy’s past year of commit activity
    Python 0 0 0 0 Updated Mar 26, 2025
  • quantify_edema Public
    HMS-IAC/quantify_edema’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 14, 2025
  • image_analysis_pancreatitis Public
    HMS-IAC/image_analysis_pancreatitis’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 19, 2025
  • qupath-workshop Public

    Materials supporting the QuPath workshop at Harvard Medical School.

    HMS-IAC/qupath-workshop’s past year of commit activity
    3 CC-BY-4.0 1 0 0 Updated Feb 10, 2025
  • dashai Public
    HMS-IAC/dashai’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 1, 2025
  • fiji-macro-workshop Public

    Materials supporting the Fiji Macro workshop at Harvard Medical School.

    HMS-IAC/fiji-macro-workshop’s past year of commit activity
    0 CC-BY-4.0 0 0 0 Updated Jan 27, 2025
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