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HadoopGenomics

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  1. Hadoop-BAM Hadoop-BAM Public

    Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework

    Java 69 52

  2. SeqPig SeqPig Public archive

    SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as …

    Java 9 8

  3. htsjdk htsjdk Public

    Forked from samtools/htsjdk

    A Java API for high-throughput sequencing data (HTS) formats.

    Java 1

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Showing 3 of 3 repositories
  • Hadoop-BAM Public

    Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework

    HadoopGenomics/Hadoop-BAM’s past year of commit activity
    Java 69 MIT 52 29 12 Updated Dec 2, 2022
  • SeqPig Public archive

    SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data.

    HadoopGenomics/SeqPig’s past year of commit activity
    Java 9 8 0 1 Updated Aug 11, 2016
  • htsjdk Public Forked from samtools/htsjdk

    A Java API for high-throughput sequencing data (HTS) formats.

    HadoopGenomics/htsjdk’s past year of commit activity
    Java 1 248 0 0 Updated Aug 13, 2014

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