JMK_COSS log likelihood for reweighting #903
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jamesmkrieger
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albertmena
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| class XmippProtComputeLikelihood(ProtAnalysis3D): | ||
| """This protocol computes the likelihood of a set of particles with assigned angles when compared to a |
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This adds a new protocol and viewer for calculating image-volume log likelihoods using either angular_continuous_assign2 or my new program in xmipp branch jmk_new_residuals (see I2PC/xmipp#991).
The protocol compares a set of N images against M volumes and outputs a duplicated set of images (NxM) with columns for residuals and log likelihoods. It also outputs a matrix as in npy file format, which is the input for the reweighting estimate protocol and the viewer.
This now works well for real images e.g.
