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Obo compliance suite #683

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Obo compliance suite #683

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cmungall
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@cmungall cmungall commented Nov 22, 2023

See

- owlcollab/oboformat#146
- geneontology/obographs#106

Note that that may move from the OAK repo in the longer term.
Addung missing features to obo conversion
@cmungall cmungall requested a review from matentzn November 22, 2023 23:25
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This is massively fantastic. I would just like to use it asap. Let suse the current ROBOT release as a baseline.

What would be nice: How can we easily use this for benchmarking arbitrary tools? Like, what would be the instruction to someone that asks "I have this awesome tool that reads OWL and writes obographs, and I want to make sure it does it correctly". Can we somehow generalise the test method in a way that we can benchmark arbitrary tools?

Also, I prefer this to be in the obographs repo if at all easy to move.

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Something is up with this PR. I tried cherry picking all the commits onto a new branch

#693

But still doesn't work...

@cmungall cmungall closed this Dec 22, 2023
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2 participants