Dashboard

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.2.1
+current_version = 1.0.1
 commit = False
 message = service version: {current_version} → {new_version}
 tag = False

.osparc/osparc-meta-parallelrunner/metadata.yml

@@ -1,7 +1,7 @@
 name: ParallelRunner
 description: "ParallelRunnerService"
 key: simcore/services/dynamic/osparc-meta-parallelrunner
-version: 0.2.1
+version: 1.0.1
 integration-version: 2.0.0
 type: dynamic
 authors:
@@ -10,30 +10,18 @@ authors:
     affiliation: IT'IS Foundation
 contact: [email protected]
 inputs:
-  input_0:
-    displayOrder: 0.0
-    label: Template ID
-    description:
-     Template ID
-    type: string
   input_1:
-    displayOrder: 1.0
-    label: Number of workers
+    displayOrder: 0.0
+    label: Settings
     description:
-      Number of parallel workers to use to run the jobs
-    type: integer
+     JSON file with settings for the parallel runner
+    type: data:*/*
   input_2:
-    displayOrder: 2.0
+    displayOrder: 1.0
     label: Input parameters
     description:
       File with the parameter sets to evaluate
     type: data:*/*
-  input_3:
-    displayOrder: 2.0
-    label: Settings
-    description:
-      JSON file with settings for the parallel runner
-    type: data:*/*
 outputs:
   output_1:
     displayOrder: 1.0

Dockerfile

@@ -1,29 +1,43 @@
-FROM ubuntu:22.04 as base
+FROM node:alpine as base
 
-RUN useradd -m -r osparcuser
+RUN adduser osparcuser --disabled-password
 
 USER root
 
 ENV DEBIAN_FRONTEND noninteractive
 ENV DEBCONF_NOWARNINGS="yes"
 
-RUN apt-get update --yes && apt-get upgrade --yes 
-RUN apt-get install -y --no-install-recommends apt-utils
-RUN apt-get install --yes --no-install-recommends python3 python-is-python3 python3-venv wget python3-pip gosu
-
+RUN apk update && apk upgrade
+RUN apk add --no-cache python3 py3-pip wget bash su-exec
 
 # Copying boot scripts                                                                                                                                                                                                                                                                                                   
 COPY docker_scripts /docker
 
-RUN pip3 install pathos osparc pydantic-settings osparc-filecomms --upgrade
-
 USER osparcuser
 
 WORKDIR /home/osparcuser
+RUN python3 -m venv venv
+RUN . ./venv/bin/activate && pip3 install -r /docker/requirements.txt 
 
 USER root
 
+WORKDIR /docker/http
+RUN npm install vite @vitejs/plugin-react --save-dev
+RUN npm create vite@latest dashboard -- --template react
+
+WORKDIR /docker/http/dashboard
+RUN npm install
+RUN npm install -D tailwindcss@latest postcss@latest autoprefixer@latest
+RUN npx tailwindcss init -p
+
+WORKDIR /docker/http/server
+RUN chown osparcuser:osparcuser jobs.json
+
+RUN npm install express
+RUN npm run build
+
+USER root
 EXPOSE 8888
+ENV JOBS_STATUS_PATH=/docker/http/server/jobs.json
 
 ENTRYPOINT [ "/bin/bash", "-c", "/docker/entrypoint.bash" ]
-CMD [ "/bin/bash", "-c", "/docker/runner.bash "]

Makefile

@@ -5,7 +5,7 @@ SHELL = /bin/sh
 MAKEFLAGS += -j2
 
 export DOCKER_IMAGE_NAME ?= osparc-meta-parallelrunner
-export DOCKER_IMAGE_TAG ?= 0.2.1
+export DOCKER_IMAGE_TAG ?= 1.0.1
 
 export MASTER_AWS_REGISTRY ?= registry.osparc-master-zmt.click
 export MASTER_REGISTRY ?= registry.osparc-master.speag.com
@@ -35,25 +35,25 @@ compose-spec: ## runs ooil to assemble the docker-compose.yml file
 		sh -c "cd /${DOCKER_IMAGE_NAME} && ooil compose"
 
 clean:
-	rm -rf docker-compose.yml
+	@rm -rf docker-compose.yml
 
 .PHONY: build
 build: clean compose-spec	## build docker image
-	chmod -R 755 docker_scripts
-	docker compose build
+	@chmod -R 755 docker_scripts
+	@docker compose build
 
 validation-clean:
-	rm -rf validation-tmp
-	cp -r validation validation-tmp
-	chmod -R 770 validation-tmp
+	@rm -rf validation-tmp
+	@cp -r validation validation-tmp
+	@chmod -R 770 validation-tmp
 
 validation_client_run: validation-clean
-	pip install osparc-filecomms
-	VALIDATION_CLIENT_INPUT_PATH=validation-tmp/outputs/output_1 VALIDATION_CLIENT_OUTPUT_PATH=validation-tmp/inputs/input_2 python validation-client/client.py
+	@pip install osparc-filecomms
+	@VALIDATION_CLIENT_INPUT_PATH=validation-tmp/outputs/output_1 VALIDATION_CLIENT_OUTPUT_PATH=validation-tmp/inputs/input_2 python validation-client/client.py
 
 docker_compose: validation-clean
-	docker compose down
-	docker compose --file docker-compose-local.yml up
+	@docker compose down
+	@docker compose --file docker-compose-local.yml up
 
 run-local-parallel: docker_compose validation_client_run
 
@@ -65,13 +65,11 @@ run-local: build
 publish-local: run-local ## push to local throw away registry to test integration
 	docker tag simcore/services/dynamic/${DOCKER_IMAGE_NAME}:${DOCKER_IMAGE_TAG} $(LOCAL_REGISTRY)/simcore/services/dynamic/$(DOCKER_IMAGE_NAME):$(DOCKER_IMAGE_TAG)
 	docker push $(LOCAL_REGISTRY)/simcore/services/dynamic/$(DOCKER_IMAGE_NAME):$(DOCKER_IMAGE_TAG)
-	@curl $(LOCAL_REGISTRY)/v2/_catalog | jq
 
 .PHONY: publish-master
 publish-master: run-local ## push to local throw away registry to test integration
 	docker tag simcore/services/dynamic/${DOCKER_IMAGE_NAME}:${DOCKER_IMAGE_TAG} $(MASTER_REGISTRY)/simcore/services/dynamic/$(DOCKER_IMAGE_NAME):$(DOCKER_IMAGE_TAG)
 	docker push $(MASTER_REGISTRY)/simcore/services/dynamic/$(DOCKER_IMAGE_NAME):$(DOCKER_IMAGE_TAG)
-	@curl $(MASTER_REGISTRY)/v2/_catalog | jq
 
 .PHONY: publish-staging
 publish-staging: run-local ## push to local throw away registry to test integration
@@ -82,7 +80,6 @@ publish-staging: run-local ## push to local throw away registry to test integrat
 publish-master-aws: ## push to local throw away registry to test integration
 	docker tag simcore/services/dynamic/${DOCKER_IMAGE_NAME}:${DOCKER_IMAGE_TAG} $(MASTER_AWS_REGISTRY)/simcore/services/dynamic/$(DOCKER_IMAGE_NAME):$(DOCKER_IMAGE_TAG)
 	docker push $(MASTER_AWS_REGISTRY)/simcore/services/dynamic/$(DOCKER_IMAGE_NAME):$(DOCKER_IMAGE_TAG)
-	@curl $(MASTER_AWS_REGISTRY)/v2/_catalog | jq
 
 .PHONY: help
 help: ## this colorful help

docker-compose-local.yml

@@ -1,6 +1,6 @@
 services:
   osparc-meta-parallelrunner:
-    image: simcore/services/dynamic/osparc-meta-parallelrunner:0.2.1
+    image: simcore/services/dynamic/osparc-meta-parallelrunner:1.0.1
     ports:
       - "8888:8888"
     environment:

docker_scripts/entrypoint.bash

@@ -1,14 +1,17 @@
 #!/bin/bash
 
 set -euo pipefail
+
 IFS=$'\n\t'
 INFO="INFO: [$(basename "$0")] "
 
 echo "$INFO" "Starting container for parallelrunner ..."
 
+echo "$JOBS_STATUS_PATH"
+
 HOST_USERID=$(stat -c %u "${DY_SIDECAR_PATH_INPUTS}")
 HOST_GROUPID=$(stat -c %g "${DY_SIDECAR_PATH_INPUTS}")
-CONTAINER_GROUPNAME=$(getent group | grep "${HOST_GROUPID}" | cut --delimiter=: --fields=1 || echo "")
+CONTAINER_GROUPNAME=$(grep ":${HOST_GROUPID}:" /etc/group | cut -d: -f1 || echo "")
 
 OSPARC_USER='osparcuser'
 
@@ -27,7 +30,7 @@ else
 	fi
 
 	echo "adding $OSPARC_USER to group $CONTAINER_GROUPNAME..."
-	usermod --append --groups "$CONTAINER_GROUPNAME" "$OSPARC_USER"
+	addgroup "$OSPARC_USER" "$CONTAINER_GROUPNAME"
 
 	echo "changing owner ship of state directory /home/${OSPARC_USER}/work/workspace"
 	chown --recursive "$OSPARC_USER" "/home/${OSPARC_USER}/work/workspace"
@@ -37,4 +40,4 @@ else
 	chown --recursive "$OSPARC_USER" "${DY_SIDECAR_PATH_OUTPUTS}"
 fi
 
-exec gosu "$OSPARC_USER" /docker/main.bash
+exec su-exec "$OSPARC_USER" /docker/main.bash

docker_scripts/http/dashboard/index.html

@@ -0,0 +1,12 @@
+<!DOCTYPE html>
+<html lang="en">
+  <head>
+    <meta charset="UTF-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>Job Status Dashboard</title>
+  </head>
+  <body>
+    <div id="root"></div>
+    <script type="module" src="/src/main.jsx"></script>
+  </body>
+</html>

docker_scripts/http/dashboard/package.json

@@ -0,0 +1,21 @@
+{
+  "name": "job-status-dashboard",
+  "private": true,
+  "version": "0.0.0",
+  "type": "module",
+  "scripts": {
+    "dev": "vite",
+    "build": "vite build",
+    "preview": "vite preview"
+  },
+  "dependencies": {
+    "react": "^18.2.0",
+    "react-dom": "^18.2.0"
+  },
+  "devDependencies": {
+    "@types/react": "^18.0.28",
+    "@types/react-dom": "^18.0.11",
+    "@vitejs/plugin-react": "^3.1.0",
+    "vite": "^4.2.0"
+  }
+}