Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

51PW reproduction #134

Merged
merged 154 commits into from
Feb 12, 2024
Merged

51PW reproduction #134

merged 154 commits into from
Feb 12, 2024

Conversation

bclenet
Copy link
Collaborator

@bclenet bclenet commented Dec 20, 2023 •
edited
Loading

This Pull Request is related to issue #133.

Changes proposed in this Pull Request:

  • 51PW reproduction
  • 51PW testing

Checklist:

  • Descriptive title
  • Targets the main branch
  • Changes are functional
  • My code is explicit and comments were added to it
  • Code conforms with PEP8
  • Tests were added for the changes and they complete successfully
  • Existing tests were updated (if needed) and they complete successfully
  • Documentation was updated

bclenet and others added 30 commits August 31, 2023 14:35
@bclenet
[BUG] inside unit_tests workflow
6986e90
@bclenet
Merge branch 'Inria-Empenn:main' into main
d6e67f3
@bclenet
Merge branch 'Inria-Empenn:main' into main
c3bfc53
@bclenet
Merge branch 'Inria-Empenn:main' into main
4b30504
@bclenet
Merge branch 'Inria-Empenn:main' into main
fd15ffc
@bclenet
Merge branch 'Inria-Empenn:main' into main
6ebe5d2
@bclenet
Merge branch 'Inria-Empenn:main' into main
0a584dd
@bclenet
Merge branch 'Inria-Empenn:main' into main
e284b80
@bclenet
Merge branch 'Inria-Empenn:main' into main
5774813
@bclenet
Merge branch 'Inria-Empenn:main' into main
8f12d3d
@bclenet
[08MQ] Preprocessing script in progress
7fde1e1
@bclenet
Working on preprocessing
2b07afc
@bclenet
Codespell
a454652
@bclenet
Working on pipeline 08MQ
aca4896
@bclenet
Merge branch 'Inria-Empenn:main' into main
91dc744
@bclenet
Towards a running version of the pipeline
8b48823
@bclenet
Conforming to Pipeline class + init test module
ecec8c2
@bclenet
Merge branch 'main' into 08MQ_reproduction
c8db382
@bclenet
Towards a running version of the pipeline
632f4ef
@bclenet
Towards a running version of the pipeline
0e97a61
@bclenet
Towards a running version of the pipeline
d3dcc00
@bclenet
[TEST] runner test not using 08MQ as example anymore
988e536
@bclenet
Issue with SelectFiles' base_directory
ffcdf6e
@bclenet
Towards a running version of the pipeline
04d835e
@bclenet
[TEST] stop using 08MQ in tests
7525309
@bclenet
08MQ preprocessing instantiable
da82396
@bclenet
Compute confounds node
8fd2195
@bclenet
Group analysis workflow bug
9a63118
@bclenet
Group analysis workflow bug
95fe702
@bclenet
Group analysis workflow bug
1ac7267
bclenet and others added 25 commits December 18, 2023 16:06
@bclenet
Removing more intermediate results [skip ci]
e0f599f
@bclenet
First version of the pipeline [skip ci]
cc1d7a5
@bclenet
Force 2.0mm resampling for alignment_func_to_anat node [skip ci]
6c228f9
@bclenet
Force 2.0mm resampling for alignment_func_to_anat node [skip ci]
40a67e1
@bclenet
[TEST][PEP8] [skip ci]
3250a6d
@bclenet
Preprocessing done [skip ci]
81173dc
@bclenet
Adding test features into 51PW_reproduction
38acfad
@bclenet
[TEST] updating test for 51PW
f60c613
@bclenet
Merge branch 'Inria-Empenn:main' into main
c9ee889
@bclenet
Merge branch 'Inria-Empenn:main' into main
9bfc89c
@bclenet
Merge branch 'Inria-Empenn:main' into main
7493f74
@bclenet
[DATALAD] change results url
a73f3c3
@bclenet
Merge pull request #3 from bclenet/results
f03f50e 
[DATALAD] change results url
@bclenet
Merge branch 'main' into 51PW_reproduction
68a923a
@bclenet
[BUG] select files in run level analysis
428473b
@bclenet
[BUG] find mask name in run-level analysis
d8bdd75
@bclenet
Remove autoregressive model fitting
9c9ebad
@bclenet
Merge branch 'main' into 51PW_reproduction
7dfa06f
@bclenet
Remove large files
1bc53fe
@bclenet
Bugs after remove file section
b51c446
@bclenet
Merge branch 'main' into 51PW_reproduction
af4d7da
@bclenet
Remove outputs
a16107a
@bclenet
[TEST] test pipeline outputs for 51PW [skip ci]
7ad084d
@bclenet
[TEST] test pipeline outputs for 51PW [skip ci]
bc9b5d2
@bclenet
Output paths
7eac2af
@bclenet bclenet marked this pull request as ready for review February 7, 2024 09:38
@bclenet bclenet merged commit 947a71d into Inria-Empenn:main Feb 12, 2024
6 of 7 checks passed
@bclenet bclenet deleted the 51PW_reproduction branch February 12, 2024 12:51
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
1 participant
@bclenet