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@JBEI

Joint BioEnergy Institute

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  1. ice ice Public

    Web based Registry platform for managing synthetic biological parts

    Java 41 24

Repositories

Showing 10 of 46 repositories
  • BioPKS-Pipeline Public
    JBEI/BioPKS-Pipeline’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 5, 2025
  • RetroTide Public

    PKS Retrobiosynthesis Tool

    JBEI/RetroTide’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Mar 31, 2025
  • Flaviolin_media_opt_C3 Public

    Data and notebooks for campaign 2 (C2) of media optimization for maximizing flaviolin yield in P. putida.

    JBEI/Flaviolin_media_opt_C3’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Mar 27, 2025
  • Flaviolin_media_opt_C2 Public

    Data and notebooks for campaign 2 (C2) of media optimization for maximizing flaviolin titer in P. putida.

    JBEI/Flaviolin_media_opt_C2’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 27, 2025
  • Flaviolin_media_opt_C1 Public

    Media optimization for flaviolin producing P. putida

    JBEI/Flaviolin_media_opt_C1’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Mar 27, 2025
  • media_compiler Public

    Code to create combinatorial media on the BioMek NXP platform with descriptions about how to use in an automated DBTL cycle.

    JBEI/media_compiler’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Mar 27, 2025
  • foldy Public

    Foldy: a web-based platform for interactive protein structure analysis

    JBEI/foldy’s past year of commit activity
    TypeScript 22 3 13 0 Updated Mar 9, 2025
  • ART Public

    A machine learning tool to improve the effectiveness of strain engineering in synthetic biology

    JBEI/ART’s past year of commit activity
    Jupyter Notebook 56 20 1 1 Updated Feb 14, 2025
  • FluxRETAP Public

    Codebase for Flux REaction TArget Prioritization (Flux RETAP) code

    JBEI/FluxRETAP’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 23, 2025
  • bayflux Public

    Software tool for Bayesian genome scale 13C Metabolic Flux Analysis

    JBEI/bayflux’s past year of commit activity
    Jupyter Notebook 4 2 0 0 Updated Jan 9, 2025
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