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JLSteenwyk · Dec 17, 2024 · b79ffb4 · b79ffb4
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diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle
diff --git a/.doctrees/index.doctree b/.doctrees/index.doctree
diff --git a/_sources/index.rst.txt b/_sources/index.rst.txt
@@ -8,10 +8,10 @@
 
 OrthoHMM using high sensitivity and specificity Hidden Markov Models for orthology inference.
 
-If you found OrthoHMM useful, please cite *MANUSCRIPT TITLE*. Steenwyk et al. 2020, JOURNAL. doi: |doiLink|_.
+If you found OrthoHMM useful, please cite *OrthoHMM: Improved Inference of Ortholog Groups using Hidden Markov Models*. Steenwyk et al. 2024, bioRxiv. doi: |doiLink|_.
 
-.. _doiLink: https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3001007
-.. |doiLink| replace:: 10.1371/journal.pbio.3001007
+.. _doiLink: https://www.biorxiv.org/content/10.1101/2024.12.07.627370v1
+.. |doiLink| replace:: 10.1101/2024.12.07.627370
 
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diff --git a/index.html b/index.html
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 <p>OrthoHMM using high sensitivity and specificity Hidden Markov Models for orthology inference.</p>
-<p>If you found OrthoHMM useful, please cite <em>MANUSCRIPT TITLE</em>. Steenwyk et al. 2020, JOURNAL. doi: <a class="reference external" href="https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3001007">10.1371/journal.pbio.3001007</a>.</p>
+<p>If you found OrthoHMM useful, please cite <em>OrthoHMM: Improved Inference of Ortholog Groups using Hidden Markov Models</em>. Steenwyk et al. 2024, bioRxiv. doi: <a class="reference external" href="https://www.biorxiv.org/content/10.1101/2024.12.07.627370v1">10.1101/2024.12.07.627370</a>.</p>
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diff --git a/searchindex.js b/searchindex.js