fixed parser check for specified substitution matrix

JLSteenwyk · Aug 23, 2024 · ff65c7c · ff65c7c
1 parent 538cbfd
commit ff65c7c
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/orthohmm/parser.py b/orthohmm/parser.py
@@ -10,6 +10,7 @@
 from .helpers import (
     StartStep,
     StopStep,
+    SubstitutionMatrix,
 )
 from .version import __version__
 
@@ -195,7 +196,7 @@ def create_parser() -> ArgumentParser:
         metavar="output_directory"
     )
 
-    substitution_matrix_choices = [step.value for step in StartStep]
+    substitution_matrix_choices = [step.value for step in SubstitutionMatrix]
     optional.add_argument(
         "-x",
         "--substitution_matrix",