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add Python Benchmark with pytest-benchmark (pytest) benchmark result …
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Dec 9, 2024
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@@ -1,5 +1,5 @@ | ||
window.BENCHMARK_DATA = { | ||
"lastUpdate": 1733248537735, | ||
"lastUpdate": 1733777567968, | ||
"repoUrl": "https://github.com/Janelia-Trackathon-2023/traccuracy", | ||
"entries": { | ||
"Python Benchmark with pytest-benchmark": [ | ||
|
@@ -4207,6 +4207,121 @@ window.BENCHMARK_DATA = { | |
"extra": "mean: 728.4624870000016 msec\nrounds: 1" | ||
} | ||
] | ||
}, | ||
{ | ||
"commit": { | ||
"author": { | ||
"email": "[email protected]", | ||
"name": "Caroline Malin-Mayor", | ||
"username": "cmalinmayor" | ||
}, | ||
"committer": { | ||
"email": "[email protected]", | ||
"name": "GitHub", | ||
"username": "web-flow" | ||
}, | ||
"distinct": true, | ||
"id": "6212b53c87627d209f65695b937ca271c26a8156", | ||
"message": "Merge pull request #171 from Janelia-Trackathon-2023/unit_tests\n\nCanonical unit test examples: Segmentations for matching, and matched graphs without divisions", | ||
"timestamp": "2024-12-09T15:47:12-05:00", | ||
"tree_id": "c8435c3858f60ad7ba20a11302e529e3c2b60513", | ||
"url": "https://github.com/Janelia-Trackathon-2023/traccuracy/commit/6212b53c87627d209f65695b937ca271c26a8156" | ||
}, | ||
"date": 1733777567522, | ||
"tool": "pytest", | ||
"benches": [ | ||
{ | ||
"name": "tests/bench.py::test_load_gt_ctc_data[2d]", | ||
"value": 0.17550905290701008, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 5.697711789999971 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_load_gt_ctc_data[3d]", | ||
"value": 0.05215236591256234, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 19.174585515000047 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_load_pred_ctc_data[2d]", | ||
"value": 0.9096305722359985, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 1.0993473949999952 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_ctc_checks[2d]", | ||
"value": 1.3196597509651362, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0.0062149241344017095", | ||
"extra": "mean: 757.7710839999838 msec\nrounds: 2" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_ctc_checks[3d]", | ||
"value": 0.09809719743895727, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 10.193971143999988 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_ctc_matcher[2d]", | ||
"value": 0.6792460148616049, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 1.4722206359999745 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_ctc_matcher[3d]", | ||
"value": 0.05927232442152023, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 16.87128031100002 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_ctc_metrics[2d]", | ||
"value": 3.3247010462897832, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 300.77892299999576 msec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_ctc_metrics[3d]", | ||
"value": 0.24024867615766146, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 4.16235384099997 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_iou_matcher[2d]", | ||
"value": 0.6445431368609117, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 1.551486538000006 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_iou_matcher[3d]", | ||
"value": 0.05598483288780908, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 17.861980619000008 sec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_iou_div_metrics[2d]", | ||
"value": 13.95667744043681, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 71.650290999969 msec\nrounds: 1" | ||
}, | ||
{ | ||
"name": "tests/bench.py::test_iou_div_metrics[3d]", | ||
"value": 1.3970919335810321, | ||
"unit": "iter/sec", | ||
"range": "stddev: 0", | ||
"extra": "mean: 715.7725099999652 msec\nrounds: 1" | ||
} | ||
] | ||
} | ||
] | ||
} | ||
|