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2 changes: 1 addition & 1 deletion tutorials/dev/.documenter-siteinfo.json
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{"documenter":{"julia_version":"1.10.5","generation_timestamp":"2024-11-04T11:59:49","documenter_version":"1.7.0"}}
{"documenter":{"julia_version":"1.10.5","generation_timestamp":"2024-11-04T12:04:05","documenter_version":"1.7.0"}}
2 changes: 1 addition & 1 deletion tutorials/dev/index.html
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2 changes: 1 addition & 1 deletion tutorials/dev/pluto_output/gnn_intro_pluto/index.html
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Expand Up @@ -252,4 +252,4 @@ <h2 id="Implementing-Graph-Neural-Networks"><a class="docs-heading-anchor" href=

<div class="markdown"><p>As one can see, our 3-layer GCN model manages to linearly separating the communities and classifying most of the nodes correctly.</p><p>Furthermore, we did this all with a few lines of code, thanks to the GraphNeuralNetworks.jl which helped us out with data handling and GNN implementations.</p></div>

<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../">« Home</a><a class="docs-footer-nextpage" href="../node_classification_pluto/">Node classification »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 11:59">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../">« Home</a><a class="docs-footer-nextpage" href="../node_classification_pluto/">Node classification »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 12:04">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion tutorials/dev/pluto_output/graph_classification_pluto/index.html
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Expand Up @@ -207,4 +207,4 @@ <h2 id="Training-a-Graph-Neural-Network-(GNN)"><a class="docs-heading-anchor" hr
<h2 id="Conclusion"><a class="docs-heading-anchor" href="#Conclusion">Conclusion</a><a id="Conclusion-1"></a><a class="docs-heading-anchor-permalink" href="#Conclusion" title="Permalink"></a></h2><div class="markdown">
<p>In this chapter, you have learned how to apply GNNs to the task of graph classification. You have learned how graphs can be batched together for better GPU utilization, and how to apply readout layers for obtaining graph embeddings rather than node embeddings.</p></div>

<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../node_classification_pluto/">« Node classification</a><a class="docs-footer-nextpage" href="../traffic_prediction/">Node autoregression »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 11:59">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../node_classification_pluto/">« Node classification</a><a class="docs-footer-nextpage" href="../traffic_prediction/">Node autoregression »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 12:04">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion tutorials/dev/pluto_output/node_classification_pluto/index.html
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Expand Up @@ -304,4 +304,4 @@ <h2 id="(Optional)-Exercises"><a class="docs-heading-anchor" href="#(Optional)-E
<h2 id="Conclusion"><a class="docs-heading-anchor" href="#Conclusion">Conclusion</a><a id="Conclusion-1"></a><a class="docs-heading-anchor-permalink" href="#Conclusion" title="Permalink"></a></h2><div class="markdown">
<p>In this tutorial, we have seen how to apply GNNs to real-world problems, and, in particular, how they can effectively be used for boosting a model's performance. In the next tutorial, we will look into how GNNs can be used for the task of graph classification.</p></div>

<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../gnn_intro_pluto/">« Hands on</a><a class="docs-footer-nextpage" href="../graph_classification_pluto/">Graph classification »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 11:59">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../gnn_intro_pluto/">« Hands on</a><a class="docs-footer-nextpage" href="../graph_classification_pluto/">Graph classification »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 12:04">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion tutorials/dev/pluto_output/temporal_graph_classification_pluto/index.html
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Expand Up @@ -186,4 +186,4 @@ <h2 id="Training"><a class="docs-heading-anchor" href="#Training">Training</a><a
<h2 id="Conclusions"><a class="docs-heading-anchor" href="#Conclusions">Conclusions</a><a id="Conclusions-1"></a><a class="docs-heading-anchor-permalink" href="#Conclusions" title="Permalink"></a></h2><div class="markdown">
<p>In this tutorial, we implemented a very simple architecture to classify temporal graphs in the context of gender classification using brain data. We then trained the model on the GPU for 100 epochs on the TemporalBrains dataset. The accuracy of the model is approximately 75-80%, but can be improved by fine-tuning the parameters and training on more data.</p></div>

<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../traffic_prediction/">« Node autoregression</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 11:59">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../traffic_prediction/">« Node autoregression</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 12:04">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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Expand Up @@ -191,4 +191,4 @@ <h2 id="Training"><a class="docs-heading-anchor" href="#Training">Training</a><a
<h2 id="Conclusion"><a class="docs-heading-anchor" href="#Conclusion">Conclusion</a><a id="Conclusion-1"></a><a class="docs-heading-anchor-permalink" href="#Conclusion" title="Permalink"></a></h2><div class="markdown">
<p>In this tutorial, we learned how to use a recurrent temporal graph convolutional network to predict traffic in a spatio-temporal setting. We used the TGCN model, which consists of a graph convolutional network (GCN) and a gated recurrent unit (GRU). We then trained the model for 100 epochs on a small subset of the METR-LA dataset. The accuracy of the model is not very good, but it can be improved by training on more data.</p></div>

<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../graph_classification_pluto/">« Graph classification</a><a class="docs-footer-nextpage" href="../temporal_graph_classification_pluto/">Temporal graph classification »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 11:59">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
<!-- PlutoStaticHTML.End --></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../graph_classification_pluto/">« Graph classification</a><a class="docs-footer-nextpage" href="../temporal_graph_classification_pluto/">Temporal graph classification »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.7.0 on <span class="colophon-date" title="Monday 4 November 2024 12:04">Monday 4 November 2024</span>. Using Julia version 1.10.5.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

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