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Support various array types in extensions #767

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Commits on Sep 7, 2022

  1. [KrylovSolvers] inner constructors -> outer constructors

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  2. Add a reference to BiCG paper

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  3. Update src/bilq.jl

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  4. [documentation] Add a section about preconditioners

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  5. Add more details about preconditioned LS and LN problems

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  6. [documentation] Add more details about preconditioners

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  7. Final version of preconditioners.md

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  8. Fix tests with CGNE

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  9. Apply suggestions from @dpo 

    Co-authored-by: Dominique <[email protected]>
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  10. Update test_solvers.jl

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  11. Update preconditioners.md

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  12. fix \tfrac in preconditioners.jl

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  13. Update docs/src/preconditioners.md 

    Co-authored-by: Dominique <[email protected]>
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  14. A^T -> A^H

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  15. [documentation] Use Aᴴ instead of Aᵀ

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  16. [test] Use Aᴴ instead of Aᵀ

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  17. [code] Use Aᴴ instead of Aᵀ

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Commits on Sep 9, 2022

  1. Test Krylov macros

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  2. Use buildkite to test the GPU support

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Commits on Sep 10, 2022

  1. Update workflows

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  2. Update CommentPR.yml

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Commits on Sep 13, 2022

  1. [documentation] update gpu.md

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  2. [documentation] Test the code of GPU backends with buildkite

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  3. Fix few typos

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  4. Apply suggestions from code review 

    Co-authored-by: Dominique <[email protected]>
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  5. [GPU] Remove random tests

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Commits on Sep 15, 2022

  1. Add more examples with the preconditioners

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  2. Update docs/src/preconditioners.md

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  3. Release 0.8.4

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Commits on Sep 22, 2022

  1. [documentation] update callbacks.md

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  2. Update docs/src/callbacks.md 

    Co-authored-by: Dominique <[email protected]>
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  3. Update callbacks.md

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Commits on Sep 23, 2022

  1. Add vector_to_matrix function

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  2. Update buildkite pipeline

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  3. Update api.md

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Commits on Sep 26, 2022

  1. An implementation of FGMRES

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  2. Add a test with a variable preconditioner

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  3. Apply suggestions from code review 

    Co-authored-by: Dominique <[email protected]>
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  4. Add fgmres in docs/src/factorization-free.md

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  5. Update src/fgmres.jl 

    Co-authored-by: Dominique <[email protected]>
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  6. Update multiple docstrings and comments

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  7. Reduce the storage required by DIOM and DQGMRES

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  8. Update test_solvers.jl

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  9. Add a comment about complex matrices in gpu.md

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  10. Fix a typo in gpu.md

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Commits on Sep 27, 2022

  1. Remove allocations in roots_quadratic

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  2. Test allocations of roots_quadratic for Julia >= 1.8

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  3. Improve roots_quadratic

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Commits on Sep 28, 2022

  1. Move callback_utils.jl file

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  2. Update tips.md

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  3. Add six Krylov processes

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  4. Add FGMRES in processes.md

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Commits on Sep 29, 2022

  1. add discussion in readme

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  2. add discussion in index

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  3. Apply suggestions from code review 

    Co-authored-by: Alexis <[email protected]>
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  4. Update README.md

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  5. Add GPU support for to_boundary function

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Commits on Oct 5, 2022

  1. Add the workflow Invalidations.yml

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  2. Use Aqua.jl in the tests

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  3. Add the support of CuSparseMatrixCOO in gpu.md

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Commits on Oct 7, 2022

  1. add imput and output arguments in all docstrings

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  2. Use semicolon

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  3. Add the size of each linear system in the docstring

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  4. Update the dimension of A

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  5. Add m and n in all Krylov solvers

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Commits on Oct 10, 2022

  1. [KrylovSolvers] Improve GPU support

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  2. Update gpu.jl

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  3. [GPU] Update the error message

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Commits on Oct 11, 2022

  1. Create a Aqua workflow

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  2. Fix Aqua workflow

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  3. Fix again the Aqua workflow

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  4. Better display of Krylov solvers

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  5. Update test_solvers.jl

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  6. Fix the sizeof of a vector of vector

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  7. Update src/krylov_solvers.jl

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  8. Improve allocation tests

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  9. Update tolerances for LSMR and SYMMLQ in allocation tests

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Commits on Oct 12, 2022

  1. Add optional argument(s) in the docstrings

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  2. [LNLQ] Use utolx and utoly instead of etolx and etoly

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Commits on Oct 16, 2022

  1. [documentation] Replace symmetric by Hermitian

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Commits on Oct 17, 2022

  1. Support a view of a matrix as a right-hand side b

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  2. Update test/gpu/nvidia.jl

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Commits on Oct 20, 2022

  1. Update test/test_utils.jl

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Commits on Oct 27, 2022

  1. Improve Krylov processes

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Commits on Oct 28, 2022

  1. Change the category of USYMLQ and USYMQR

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  2. Update src/usymqr.jl

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Commits on Nov 1, 2022

  1. Fix a typo in processes.md

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Commits on Nov 3, 2022

  1. Add a comment about the non-Hermitian Lanczos process

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Commits on Nov 5, 2022

  1. [documentation] Add a section storage requirements

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  2. Fix two typos

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  3. Update docs/src/storage.md 

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  4. Update docs/src/storage.md

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Commits on Nov 6, 2022

  1. Use the same tolerance for all allocation tests

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Commits on Nov 10, 2022

  1. Update the show function for Krylov solvers

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Commits on Nov 11, 2022

  1. Add a keyword argument iostream for all Krylov methods

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  2. Hack with kstdout

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  3. Use kstdout in all docstrings

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  4. Use Core.stdout

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  5. Fix verbose mode in CG-LANCZOS-SHIFT

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Commits on Nov 15, 2022

  1. [documentation] Remove the subsection restarted methods

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  2. Update docs/make.jl

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Commits on Nov 21, 2022

  1. [documentation] Add notes about relations between processes

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  2. Add a table to summarize the most relevant processes for each linear … 

    …problem
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  3. Add a second reference for the Golub-Kahan process

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  4. Add another note for the Golub-Kahan process

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  5. Apply suggestions from code review 

    Co-authored-by: Dominique <[email protected]>
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Commits on Nov 25, 2022

  1. Add the list of keyword arguments for all Krylov methods

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  2. Regroup diagonal scaling factors of TriCG, TriMR and GPMR

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  3. Replace ctol by Artol in MINRES-QLP

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  4. window=5 by default in SYMMLQ

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  5. Remove duplicate tolerances in MINRES

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  6. Add rtol in LSLQ

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  7. Add documentation for all Keyword arguments

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  8. Update MINRES and MINRES-QLP

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  9. Check all docstrings

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  10. Release 0.9.0

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Commits on Nov 29, 2022

  1. Update CI for aarch64 Mac -- Apple M1

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Commits on Dec 19, 2022

  1. Add an example with BasicLU.jl in preconditioners.md

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Commits on Dec 21, 2022

  1. Use Cirrus to test Krylov.jl with Apple M1

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Commits on Dec 23, 2022

  1. Switch Metal.jl CI to the juliaecosystem pipeline.

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Commits on Jan 2, 2023

  1. Use JET to fix bugs and type instabilities

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Commits on Jan 23, 2023

  1. Add new tests for GPUs

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  2. Use sparse_laplacian instead of symmetric_indefinite for GPU tests

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  3. [buildkite] Use Julia 1.9 for AMD GPUs

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  4. Use symmetric_definite instead of sparse_laplacian for GPU tests

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  5. Debug minres_qlp with verbose mode

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  6. Relax the tolerance of the stopping condition based on the backward e… 

    …rror
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  7. Use master branch of AMDGPU.jl

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Commits on Feb 9, 2023

  1. Allow more generic storage type S

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  2. Small modification for FillArrays package

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Commits on Feb 13, 2023

  1. [buildkite] Remove the build with AMDGPU.jl]

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  2. Check that the KrylovSolvers are compatible with the dimension of the… 

    … linear problems
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  3. Add tests for compatibility between KrylovSolvers and the dimension o… 

    …f the linear problems
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  4. Update solver tests for Julia 1.6

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Commits on Feb 20, 2023

  1. [documentation] Update the page related to the GPU support

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  2. Update docs/src/gpu.md 

    Co-authored-by: Paul Raynaud <[email protected]>
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Commits on Mar 6, 2023

  1. Update LICENSE.md

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Commits on Mar 7, 2023

  1. [documentation] Update the GPU section

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  2. [documentation] Use ILU(0) and IC(0) in the comments

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Commits on Mar 10, 2023

  1. Update the reference of the GPMR paper

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Commits on Mar 24, 2023

  1. Fix the documentation for CUDA.jl 4.1

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  2. Update .buildkite again

    @amontoison
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  3. Update docs/src/gpu.md 

    Co-authored-by: tmigot <[email protected]>
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Commits on Mar 29, 2023

  1. Fix some typos 

    Signed-off-by: Alexander Seiler <[email protected]>
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Commits on Mar 30, 2023

  1. Add a threshold for codecov

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Commits on Mar 31, 2023

  1. [documentation] Use CUDA.zeros instead of similar

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Commits on May 1, 2023

  1. Add a reference for CR

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Commits on May 8, 2023

  1. Test Krylov.jl with CUDA 12.1.1

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  2. [documentation] Remove the comment about unstable CUDA toolkits

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  3. Improve test_mp.jl

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  4. Add a keyword argument timemax for all Krylov methods

    @amontoison
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Commits on May 10, 2023

  1. Update Breakage.yml for LinearSolve.jl

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  2. Use metaprogramming to define the kwargs of all Krylov methods

    @amontoison
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  3. Add an extract_parameters function

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  4. [documentation] Update reference.md

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  5. Update the kwargs of the in-place methods

    @amontoison
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  6. Update codecov.yml

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  7. Display a warning when the operator and the right-hand side don't hav… 

    …e the same type
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  8. Fix a typo in CG-LANCZOS

    @amontoison
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  9. Combine the allocation of the KrylovSolver with the warm-start

    @amontoison
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  10. Fix my sed command

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Commits on May 11, 2023

  1. Test the verbose mode

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  2. Take into account the time to allocate the KrylovSolver 

    and perform warm-start when the timemax option is used
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Commits on May 12, 2023

  1. Update the verbose mode to display a timer

    @amontoison
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  2. Add a field timer in the statistics

    @amontoison
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  3. Update test_stats.jl

    @amontoison
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  4. Update the KrylovSolvers to support the timer in KrylovStats

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  5. Update stats.timer in all Krylov methods

    @amontoison
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  6. Release 0.9.1

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Commits on May 15, 2023

  1. Improve the reliability of solver.stats.timer

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Commits on Jun 28, 2023

  1. [CI] Remove the build with Linux ARM

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Commits on Jul 4, 2023

  1. Optimize the generic function solve!

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  2. Add methods solve! with optional arguments

    @amontoison
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  3. Add tests for in-place methods with keyword arguments

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Commits on Jul 16, 2023

  1. Fix tests with Apple GPUs

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  2. Use metaprogramming to reduce the code

    @amontoison
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  3. Update .builkite/pipeline.yml

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  4. Keep tests with AMDGPU.jl commented

    @amontoison
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  5. Release 0.9.2

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Commits on Aug 8, 2023

  1. Support StaticArrays in an extension

    @gdalle
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  2. Actually test extensions

    @gdalle
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  3. Requires is not a stale dependency

    @gdalle
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  4. Fix Aqua

    @gdalle
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  5. Fix Project.toml order

    @gdalle
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  6. Fix Requires

    @gdalle
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  7. Refix Requires

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  8. Move FillArrays support to extension

    @gdalle
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  9. Normal Aqua tests

    @gdalle
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Commits on Aug 9, 2023

  1. Add ComponentArrays support

    @gdalle
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  2. Fix docstrings

    @gdalle
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