Merge pull request #126 from KPMP/KPMP-5130_Adj_P_val

Kpmp 5130 adj p val
KPMP · Feb 29, 2024 · 5ac6763 · 5ac6763
2 parents 0d22891 + dab6ed1
commit 5ac6763
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Showing 6 changed files with 45 additions and 0 deletions.
diff --git a/src/main/java/org/kpmp/geneExpression/RTExpressionData.java b/src/main/java/org/kpmp/geneExpression/RTExpressionData.java
@@ -40,4 +40,9 @@ public interface RTExpressionData {
 	Integer getSampleCount();
 
 	void setSampleCount(Integer sampleCount);
+
+	Double getAdjPVal();
+
+	void setAdjPVal(Double adjPVal);
+
 }
diff --git a/src/main/java/org/kpmp/geneExpression/RTExpressionDataAllSegments.java b/src/main/java/org/kpmp/geneExpression/RTExpressionDataAllSegments.java
@@ -31,6 +31,8 @@ public class RTExpressionDataAllSegments implements RTExpressionData, Serializab
 	private Double pValLog10;
 	@Column(name = "tissue_type")
 	private String tissueType;
+	@Column(name = "adj_p_val")
+	private Double adjPVal;
 	@Column(name = "sample_count")
 	private Integer sampleCount;
 
@@ -133,4 +135,14 @@ public String getSegmentName() {
 	public void setSegmentName(String segmentName) {
 		this.segmentName = segmentName;
 	}
+
+	@Override
+	public Double getAdjPVal() {
+		return adjPVal;
+	}
+
+	@Override
+	public void setAdjPVal(Double adjPVal) {
+		this.adjPVal = adjPVal;
+	}
 }
diff --git a/src/main/java/org/kpmp/geneExpression/RTExpressionDataGTI.java b/src/main/java/org/kpmp/geneExpression/RTExpressionDataGTI.java
@@ -31,6 +31,8 @@ public class RTExpressionDataGTI implements RTExpressionData, Serializable {
 	private Double pValLog10;
 	@Column(name = "tissue_type")
 	private String tissueType;
+	@Column(name = "adj_p_val")
+	private Double adjPVal;
 	@Column(name = "sample_count")
 	private Integer sampleCount;
 
@@ -133,4 +135,14 @@ public String getSegmentName() {
 	public void setSegmentName(String segmentName) {
 		this.segmentName = segmentName;
 	}
+
+	@Override
+	public Double getAdjPVal() {
+		return adjPVal;
+	}
+
+	@Override
+	public void setAdjPVal(Double adjPVal) {
+		this.adjPVal = adjPVal;
+	}
 }
diff --git a/src/main/resources/knowledge_environment.graphqls b/src/main/resources/knowledge_environment.graphqls
@@ -176,6 +176,7 @@ type RTGeneExpression {
     pValLog10: Float
     tissueType: String
     sampleCount: Int
+    adjPVal: Float
 }
 
 type RTGeneExpressionByTissue {

diff --git a/src/test/java/org/kpmp/geneExpression/RTExpressionDataAllSegmentsTest.java b/src/test/java/org/kpmp/geneExpression/RTExpressionDataAllSegmentsTest.java
@@ -80,4 +80,10 @@ void setSegmentName() {
 		assertEquals("segmentName", rtExpressionDataAllSegments.getSegmentName());
 	}
 
+	@Test
+	void setAdjPVal() {
+		rtExpressionDataAllSegments.setAdjPVal(123.456);
+		assertEquals(123.456, rtExpressionDataAllSegments.getAdjPVal(), 0.001);
+	}
+
 }
diff --git a/src/test/java/org/kpmp/geneExpression/RTExpressionDataGTITest.java b/src/test/java/org/kpmp/geneExpression/RTExpressionDataGTITest.java
@@ -2,6 +2,7 @@
 
 import static org.junit.jupiter.api.Assertions.assertEquals;
 
+import org.junit.Assert;
 import org.junit.jupiter.api.AfterEach;
 import org.junit.jupiter.api.BeforeEach;
 import org.junit.jupiter.api.Test;
@@ -80,4 +81,12 @@ void setSegmentName() {
 		assertEquals("segmentName", rtExpressionDataGTI.getSegmentName());
 	}
 
+	@Test
+	void setAdjPVal() {
+		rtExpressionDataGTI.setAdjPVal(123.456);
+		Assert.assertEquals(123.456, rtExpressionDataGTI.getAdjPVal(), 0.001);
+	}
+
+
+
 }