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XLEC

An integrative approach combining cross-linking data and evolutionary couplings for large-scale prediction and modeling of protein-protein interactions.

External software

Blast https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download

HADDOCK https://www.bonvinlab.org/software/haddock2.4/download/

pdb-tools http://www.bonvinlab.org/pdb-tools/

TOPOLINK http://leandro.iqm.unicamp.br/topolink/download.shtml

PyMol https://pymol.org/2/

Alphafold Protein Structrue Database https://alphafold.ebi.ac.uk/

Alphafold https://github.com/deepmind/alphafold

Naccess http://www.bioinf.manchester.ac.uk/naccess/

Databases

UniProt: https://www.uniprot.org

PDB: https://www.rcsb.org

Documentation and tutorials

in progress

License

XLEC is available under an MIT license

References

Contributors

XLEC is developed by Hadeer Elhabashy in the Kohlbacher Lab, Max Planck Institute for Biology and Tuebingen University

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