v1.6.0

SBML v1.6.0

Diff since v1.5.1

Merged pull requests:

• add support for groups extension (#260) (@exaexa)
• Add SBMLImporter to the README (#261) (@sebapersson)
• remove some old files (why did we have travis anyway?) (#262) (@exaexa)
• implement broadcastable() for basic SBML structs (#264) (@exaexa)
• implement do-able IO functions (#266) (@exaexa)
• convert the yuge union into a relatively nice supertype match (#267) (@exaexa)
• add dependabot config (#268) (@exaexa)
• add actual dep versions (#269) (@exaexa)
• Bump julia-actions/setup-julia from 1 to 2 (#270) (@dependabot[bot])
• Bump codecov/codecov-action from 3 to 5 (#271) (@dependabot[bot])

Closed issues:

• doable methods for readSBML and writeSBML (#192)
• Overload broadcasting behavour (#263)
• simplify the broadcastable type references (#265)

v1.5.1

SBML v1.5.1

Diff since v1.5.0

Merged pull requests:

• bump documenter version, use doc pkg cache (#256) (@exaexa)
• Add support for specie conversionFactor (#259) (@sebapersson)

Closed issues:

• Add support for species conversion factor (#257)
• Support StoichiometryMath (#258)

v1.5.0

SBML v1.5.0

Diff since v1.4.4

Closed issues:

• readSBML fails on SBML semantic test case 00928 (#254)

Merged pull requests:

• Fix non-mandatory event IDs (#255) (@exaexa)

v1.4.4

SBML v1.4.4

Diff since v1.4.3

Merged pull requests:

• add sbmlPower dispatch (#250) (@paulflang)
• add test for sbmlPower (#252) (@paulflang)

v1.4.3

SBML v1.4.3

Diff since v1.4.2

Closed issues:

• Bad annotation crashes the cvterm extraction (#248)

Merged pull requests:

• do not crash on misclassified bqbiol/bqmodel cvterms (#249) (@exaexa)

v1.4.2

SBML v1.4.2

Diff since v1.4.1

Merged pull requests:

• fixup throw_severities, allow converters to change error reporting (#246) (@exaexa)
• support more CVTerms and annotations (#247) (@exaexa)

v1.4.1

SBML v1.4.1

Diff since v1.4.0

Closed issues:

• writing/exporting SBML (#239)

Merged pull requests:

• add functions that make it easy to get models from a url and sbml-test-suite (#241) (@anandijain)
• [CI] Use julia-actions/cache for caching (#242) (@giordano)
• make throwing SBML load errors configurable (#243) (@exaexa)
• clean up the SBML test suite URL machinery (#245) (@exaexa)

v1.4.0

SBML v1.4.0

Diff since v1.3.0

Merged pull requests:

• use_value_from_trigger_time is semantically a Bool (#236) (@exaexa)
• include ccov badge (#237) (@exaexa)
• add convert_promote_expand (#238) (@paulflang)

v1.3.0

SBML v1.3.0

Diff since v1.2.0

Closed issues:

• support reading of the CV terms (#27)
• SBML model does not load with reaction or metabolite annotations (#208)
• Use XML.jl to represent annotations (#209)

Merged pull requests:

• implement the special handling for avogadro constant (#233) (@exaexa)
• Fix backwards compatibility of interpret_math with Avogadroes (#234) (@exaexa)
• support CV terms (#235) (@exaexa)

v1.2.0

SBML v1.2.0

Diff since v1.1.0

Closed issues:

• Check possible silent errors while building SBML structure (#217)

Merged pull requests:

• allow github collaborators to /format stuff (#227) (@exaexa)
• update compathelper scriptage (#228) (@exaexa)
• support SBO terms (+ bonuses) (#229) (@exaexa)
• fix sbmlRelational error with Num arguments (#230) (@paulflang)
• cleanup&fix the sbmlRelational patch (#231) (@exaexa)
• bump version to 1.2.0 (#232) (@exaexa)