🚀 Automatically rebuilt derived files (OBOFoundry#2163)

Co-authored-by: GitHub Action <[email protected]>
LK112019 · Oct 27, 2022 · 0b0312c · 0b0312c
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Showing 5 changed files with 1,255 additions and 1,149 deletions.
diff --git a/_config.yml b/_config.yml
@@ -290,6 +290,10 @@ ontologies:
   products:
   - id: bco.owl
     ontology_purl: http://purl.obolibrary.org/obo/bco.owl
+  publications:
+  - id: https://doi.org/10.1371/journal.pone.0089606
+    title: 'Semantics in Support of Biodiversity Knowledge Discovery: An Introduction
+      to the Biological Collections Ontology and Related Ontologies'
   repository: https://github.com/BiodiversityOntologies/bco
   tags:
   - biodiversity collections
@@ -427,9 +431,9 @@ ontologies:
   id: caro
   layout: ontology_detail
   license:
-    label: CC BY 3.0
+    label: CC BY 4.0
     logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
-    url: https://creativecommons.org/licenses/by/3.0/
+    url: https://creativecommons.org/licenses/by/4.0/
   ontology_purl: http://purl.obolibrary.org/obo/caro.owl
   preferredPrefix: CARO
   products:
@@ -1828,6 +1832,18 @@ ontologies:
     ontology_purl: http://purl.obolibrary.org/obo/emapa.owl
   - id: emapa.obo
     ontology_purl: http://purl.obolibrary.org/obo/emapa.obo
+  publications:
+  - id: https://www.ncbi.nlm.nih.gov/pubmed/9651497
+    title: An internet-accessible database of mouse developmental anatomy based on
+      a systematic nomenclature
+  - id: https://www.ncbi.nlm.nih.gov/pubmed/23972281
+    title: 'EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update'
+  - id: https://www.ncbi.nlm.nih.gov/pubmed/26208972
+    title: 'Mouse Anatomy Ontologies: Enhancements and Tools for Exploring and Integrating
+      Biomedical Data'
+  - id: https://doi.org/10.1016/B978-0-12-800043-4.00023-3
+    title: 'Textual Anatomics: the Mouse Developmental Anatomy Ontology and the Gene
+      Expression Database for Mouse Development (GXD)'
   repository: https://github.com/obophenotype/mouse-anatomy-ontology
   taxon:
     id: NCBITaxon:10088
@@ -3142,6 +3158,10 @@ ontologies:
   products:
   - id: iceo.owl
     ontology_purl: http://purl.obolibrary.org/obo/iceo.owl
+  publications:
+  - id: https://www.ncbi.nlm.nih.gov/pubmed/35058462
+    title: ICEO, a biological ontology for representing and analyzing bacterial integrative
+      and conjugative elements
   repository: https://github.com/ontoice/ICEO
   title: Integrative and Conjugative Element Ontology
   tracker: https://github.com/ontoice/ICEO/issues

diff --git a/registry/ontologies.jsonld b/registry/ontologies.jsonld
@@ -397,6 +397,12 @@
                     "ontology_purl": "http://purl.obolibrary.org/obo/bco.owl"
                 }
             ],
+            "publications": [
+                {
+                    "id": "https://doi.org/10.1371/journal.pone.0089606",
+                    "title": "Semantics in Support of Biodiversity Knowledge Discovery: An Introduction to the Biological Collections Ontology and Related Ontologies"
+                }
+            ],
             "repository": "https://github.com/BiodiversityOntologies/bco",
             "tags": [
                 "biodiversity collections"
@@ -578,9 +584,9 @@
             "id": "caro",
             "layout": "ontology_detail",
             "license": {
-                "label": "CC BY 3.0",
+                "label": "CC BY 4.0",
                 "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
-                "url": "https://creativecommons.org/licenses/by/3.0/"
+                "url": "https://creativecommons.org/licenses/by/4.0/"
             },
             "ontology_purl": "http://purl.obolibrary.org/obo/caro.owl",
             "preferredPrefix": "CARO",
@@ -2559,6 +2565,24 @@
                     "ontology_purl": "http://purl.obolibrary.org/obo/emapa.obo"
                 }
             ],
+            "publications": [
+                {
+                    "id": "https://www.ncbi.nlm.nih.gov/pubmed/9651497",
+                    "title": "An internet-accessible database of mouse developmental anatomy based on a systematic nomenclature"
+                },
+                {
+                    "id": "https://www.ncbi.nlm.nih.gov/pubmed/23972281",
+                    "title": "EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update"
+                },
+                {
+                    "id": "https://www.ncbi.nlm.nih.gov/pubmed/26208972",
+                    "title": "Mouse Anatomy Ontologies: Enhancements and Tools for Exploring and Integrating Biomedical Data"
+                },
+                {
+                    "id": "https://doi.org/10.1016/B978-0-12-800043-4.00023-3",
+                    "title": "Textual Anatomics: the Mouse Developmental Anatomy Ontology and the Gene Expression Database for Mouse Development (GXD)"
+                }
+            ],
             "repository": "https://github.com/obophenotype/mouse-anatomy-ontology",
             "taxon": {
                 "id": "NCBITaxon:10088",
@@ -4419,6 +4443,12 @@
                     "ontology_purl": "http://purl.obolibrary.org/obo/iceo.owl"
                 }
             ],
+            "publications": [
+                {
+                    "id": "https://www.ncbi.nlm.nih.gov/pubmed/35058462",
+                    "title": "ICEO, a biological ontology for representing and analyzing bacterial integrative and conjugative elements"
+                }
+            ],
             "repository": "https://github.com/ontoice/ICEO",
             "title": "Integrative and Conjugative Element Ontology",
             "tracker": "https://github.com/ontoice/ICEO/issues"