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Remove some spe objects we won't use later
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lcolladotor committed Jul 11, 2024
1 parent 9dcfca1 commit 5a487d7
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3 changes: 3 additions & 0 deletions R/add_qc_metrics.R
Original file line number Diff line number Diff line change
Expand Up @@ -80,6 +80,9 @@
#' )
#' vis_clus(spe_qc, sample_id = "Br6432_ant", clustervar = "our_low_lib_edge")
#'
#' ## Clean up
#' rm(spe_qc, spec_pre_qc)
#'
add_qc_metrics <- function(spe, overwrite = FALSE) {
stopifnot("in_tissue" %in% colnames(colData(spe)))
stopifnot("sum_umi" %in% colnames(colData(spe)))
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3 changes: 3 additions & 0 deletions man/add_qc_metrics.Rd

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