Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
taoliu authored Apr 5, 2019
1 parent 2c67823 commit d2d1638
Showing 1 changed file with 0 additions and 2 deletions.
2 changes: 0 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -20,8 +20,6 @@ Assume that you have a BAM file from aligner such as ```bwa mem``` named ```ATAC

```java -jar HMMRATAC_V1.2.4_exe.jar -b ATACseq.sorted.bam -i ATACseq.sorted.bam.bai -g genome.info```

**NOTE: Earlier versions of HMMRATAC require a bigwig file. See HMMRATAC_Guide.txt for more detail**

Samtools can be downloaded here: http://www.htslib.org/download/

Be sure to run HMMRATAC using the executable file, found here:
Expand Down

0 comments on commit d2d1638

Please sign in to comment.