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added outline for ontology patching during load
updated methods.py with definition for ising added techniques hierarchy to graphml -> ttl output
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Original file line number | Diff line number | Diff line change |
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@@ -0,0 +1,10 @@ | ||
--- a/ttl/bridge/doid-bridge.ttl | ||
+++ b/ttl/bridge/doid-bridge.ttl | ||
@@ -12,6 +12,7 @@ | ||
<http://ontology.neuinfo.org/NIF/ttl/generated/symp-dead.ttl>, | ||
<http://ontology.neuinfo.org/NIF/ttl/generated/trans-dead.ttl>, | ||
<http://ontology.neuinfo.org/NIF/ttl/nif_backend.ttl>, | ||
+ <http://ontology.neuinfo.org/NIF/ttl/external/doid-ext.owl>, | ||
<http://purl.obolibrary.org/obo/doid.owl> . | ||
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### Annotations |
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Original file line number | Diff line number | Diff line change |
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@@ -0,0 +1,10 @@ | ||
--- a/ttl/external/doid-ext.owl | ||
+++ b/ttl/external/doid-ext.owl | ||
@@ -15,5 +15,4 @@ | ||
Import(<http://purl.obolibrary.org/obo/doid/imports/hp_import.owl>) | ||
Import(<http://purl.obolibrary.org/obo/doid/imports/omim_susc_import.owl>) | ||
Import(<http://purl.obolibrary.org/obo/doid/imports/relations.owl>) | ||
-Import(<http://purl.obolibrary.org/obo/doid/imports/so.owl>) | ||
-) | ||
\ No newline at end of file | ||
+) |
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@@ -0,0 +1,10 @@ | ||
--- a/ttl/external/doid.owl | ||
+++ b/ttl/external/doid.owl | ||
@@ -12,7 +12,6 @@ | ||
xmlns:dc="http://purl.org/dc/elements/1.1/"> | ||
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/doid.owl"> | ||
<owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/doid/releases/2018-03-02/doid.owl"/> | ||
- <owl:imports rdf:resource="http://purl.obolibrary.org/obo/doid/obo/ext.owl"/> | ||
<oboInOwl:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string">02:03:2018 14:00</oboInOwl:date> | ||
<oboInOwl:default-namespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease_ontology</oboInOwl:default-namespace> | ||
<oboInOwl:saved-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">lschriml</oboInOwl:saved-by> |
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doid-import-patchset: | ||
doid-ext.patch: | ||
target: ttl/external/doid.owl | ||
remote: http://purl.obolibrary.org/obo/doid.owl | ||
doid-ext-so.patch: | ||
target: ttl/external/doid-ext.owl | ||
remote: http://purl.obolibrary.org/obo/doid/obo/ext.owl | ||
doid-bridge-ext.patch: | ||
target: ttl/bridge/doid-bridge.ttl | ||
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