Switch to miniforge, bump to py3.13 #110
Triggered via pull request
November 11, 2024 09:08
Status
Cancelled
Total duration
2m 4s
Artifacts
–
gh-ci.yaml
on: pull_request
pylint_check
0s
pypi_check
0s
Matrix: main-tests
Annotations
35 errors and 35 warnings
main-tests (ubuntu-latest, 3.13, develop)
The process '/home/runner/miniconda3/condabin/mamba' failed with exit code 1
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main-tests (macOS-latest, 3.13, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (macOS-latest, 3.11, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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pypi_check
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (macOS-latest, 3.12, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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pylint_check
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.10, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.10, develop)
The operation was canceled.
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main-tests (windows-latest, 3.11, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.11, develop)
The operation was canceled.
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main-tests (windows-latest, 3.11, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.11, latest)
The operation was canceled.
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main-tests (windows-latest, 3.12, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.12, develop)
The operation was canceled.
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main-tests (ubuntu-latest, 3.10, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (ubuntu-latest, 3.10, latest)
The operation was canceled.
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main-tests (windows-latest, 3.10, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.10, latest)
The operation was canceled.
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main-tests (macOS-latest, 3.12, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (macOS-latest, 3.12, develop)
The operation was canceled.
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main-tests (macOS-latest, 3.10, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (macOS-latest, 3.10, develop)
The operation was canceled.
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main-tests (macOS-latest, 3.10, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (macOS-latest, 3.11, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.13, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.13, develop)
The operation was canceled.
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main-tests (windows-latest, 3.12, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (windows-latest, 3.12, latest)
The operation was canceled.
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main-tests (ubuntu-latest, 3.11, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (ubuntu-latest, 3.11, latest)
The operation was canceled.
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main-tests (ubuntu-latest, 3.12, latest)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (ubuntu-latest, 3.12, latest)
The operation was canceled.
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main-tests (ubuntu-latest, 3.10, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (ubuntu-latest, 3.12, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (ubuntu-latest, 3.11, develop)
Canceling since a higher priority waiting request for 'refs/pull/22/merge-py313-miniforge-GH Actions CI' exists
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main-tests (ubuntu-latest, 3.13, develop)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (ubuntu-latest, 3.13, develop)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (ubuntu-latest, 3.13, develop)
LibMambaUnsatisfiableError: Encountered problems while solving:
- nothing provides _python_rc needed by python-3.13.0rc1-h3b4618f_0_cp313t
Could not solve for environment specs
The following packages are incompatible
├─ mdanalysistests is installable with the potential options
│ ├─ mdanalysistests 0.15.0 would require
│ │ └─ mdanalysis 0.15.0 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests 0.16.0 would require
│ │ └─ mdanalysis 0.16.0 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests 0.16.1 would require
│ │ └─ mdanalysis 0.16.1 , which does not exist (perhaps a missing channel);
│ ├─ mdanalysistests [0.16.2|0.17.0|...|0.20.1] would require
│ │ └─ python [2.7* |>=2.7,<2.8.0a0 ], which can be installed;
│ ├─ mdanalysistests [0.17.0|0.18.0] would require
│ │ └─ python [3.5* |>=3.5,<3.6.0a0 ], which can be installed;
│ ├─ mdanalysistests 0.17.0 would require
│ │ └─ python 3.6* , which can be installed;
│ ├─ mdanalysistests [0.18.0|0.19.0|...|2.0.0] would require
│ │ └─ python >=3.6,<3.7.0a0 , which can be installed;
│ ├─ mdanalysistests [0.19.2|0.20.1|...|2.1.0] would require
│ │ └─ python >=3.7,<3.8.0a0 , which can be installed;
│ ├─ mdanalysistests [0.20.1|1.0.0|...|2.2.0] would require
│ │ └─ python >=3.8,<3.9.0a0 , which can be installed;
│ ├─ mdanalysistests [2.0.0|2.1.0|2.2.0] would require
│ │ └─ python >=3.9,<3.10.0a0 , which can be installed;
│ ├─ mdanalysistests [2.1.0|2.2.0] would require
│ │ └─ python >=3.10,<3.11.0a0 , which can be installed;
│ ├─ mdanalysistests [2.2.0|2.3.0] would require
│ │ └─ python >=3.8,<=3.10 , which can be installed;
│ ├─ mdanalysistests [2.4.1|2.4.2|2.4.3] would require
│ │ └─ python >=3.8,<=3.11 , which can be installed;
│ ├─ mdanalysistests [2.5.0|2.6.1] would require
│ │ └─ python >=3.9,<=3.11 , which can be installed;
│ └─ mdanalysistests 2.7.0 would require
│ └─ python >=3.9,<=3.12 with the potential options
│ ├─ python 3.10.0, which can be installed;
│ ├─ python [3.10.1|3.10.10|...|3.10.9], which can be installed;
│ ├─ python 3.11.0, which can be installed;
│ ├─ python [3.11.1|3.11.10|...|3.11.9], which can be installed;
│ ├─ python [3.9.0|3.9.1|...|3.9.9], which can be installed;
│ ├─ python 3.12.0, which can be installed;
│ └─ python [3.12.0rc3|3.13.0rc1|3.13.0rc2|3.13.0rc3] would require
│ └─ _python_rc, which does not exist (perhaps a missing channel);
├─ python 3.13** is not installable because there are no viable options
│ ├─ python 3.13.0 conflicts with any installable versions previously reported;
│ └─ python [3.12.0rc3|3.13.0rc1|3.13.0rc2|3.13.0rc3], which cannot be installed (as previously explained);
└─ scipy >=1.5.0 is installable with the potential options
├─ scipy [1.5.0|1.5.1|1.5.2|1.5.3] would require
│ └─ python >=3.6,<3.7.0a0 , which can be installed;
├─ scipy [1.5.0|1.5.1|1.5.2|1.5.3] would require
│ └─ python_abi 3.6 *_pypy36_pp73, which requires
│ └─ python 3.6.* *_73_pypy, which can be installed;
├─ scipy [1.5.0|1.5.1|...|1.7.3] would require
│ └─ python >=3.7,<3.8.0a0 , which can be installed;
├─ scipy [1.10.0|1.10.1|...|1.9.3] would require
│ └─ python >=3.8,<3.9.0a0 , which can be installed;
├─ scipy [1.10.0|1.10.1|...|1.9.3] would require
│ └─ python >=3.9,<3.10.0a0 , which can be installed;
├─ scipy [1.6.0|1.6.1|...|1.7.3] would require
│ └─ python_abi 3.7 *_pypy37_pp73, which requires
│ └─ python 3.7.* *_73_pypy, which can be installed;
├─ scipy [1.10.0|1.10.1|...|1.9.3] would require
│ └─ python >=3.10,<3.11.0a0 , which can be installed;
├─ scipy 1.8.1 would require
│ └─ python_abi 3.8 *_pypy38_pp73, which requires
│ └─ python 3.8.* *_73_pypy, which can be installed;
├─ scipy [1.11.3|1.11.4|1.12.0|1.8.1] would require
│ ├─ pypy3.9 >=7.3.13 , which requires
│ │ └─ python 3.9.* *_73_pypy, which can be installed;
│ └─ python_abi 3.9 *_pypy39_pp73, which requires
│ └─ python 3.9.* *_73_pypy, whic
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main-tests (windows-latest, 3.10, develop)
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (windows-latest, 3.10, develop)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (windows-latest, 3.11, develop)
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (windows-latest, 3.11, develop)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (windows-latest, 3.11, latest)
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (windows-latest, 3.11, latest)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (windows-latest, 3.12, develop)
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (windows-latest, 3.12, develop)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (ubuntu-latest, 3.10, latest)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (ubuntu-latest, 3.10, latest)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (macOS-latest, 3.12, develop)
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (macOS-latest, 3.12, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (macOS-latest, 3.10, develop)
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (macOS-latest, 3.10, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (macOS-latest, 3.10, latest)
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (macOS-latest, 3.10, latest)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (macOS-latest, 3.11, develop)
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (macOS-latest, 3.11, develop)
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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main-tests (windows-latest, 3.13, develop)
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (windows-latest, 3.13, develop)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (windows-latest, 3.12, latest)
C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
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main-tests (windows-latest, 3.12, latest)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.11, latest)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
|
main-tests (ubuntu-latest, 3.11, latest)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.12, latest)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
|
main-tests (ubuntu-latest, 3.12, latest)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.10, develop)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
|
main-tests (ubuntu-latest, 3.10, develop)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.12, develop)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
|
main-tests (ubuntu-latest, 3.12, develop)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|
main-tests (ubuntu-latest, 3.11, develop)
/home/runner/miniconda3/lib/python3.12/site-packages/conda/cli/main_config.py:738: FutureWarning: Adding 'defaults' to channel list implicitly. is deprecated and will be removed in 25.3. In the future, defaults won't be added when 'conda config --add/--append channels' is used. If you depend on that behavior, run 'conda config --append channels defaults'.
deprecated.topic(
|
main-tests (ubuntu-latest, 3.11, develop)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
|