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@MPUSP

Max Planck Unit for the Science of Pathogens

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  1. snakemake-ms-proteomics snakemake-ms-proteomics Public

    Pipeline for automatic processing and quality control of mass spectrometry data

    Python 6

  2. nf-core-crispriscreen nf-core-crispriscreen Public

    Process next generation sequencing data obtained from CRISPRi repression library screenings

    Nextflow 5 2

  3. snakemake-crispr-guides snakemake-crispr-guides Public

    A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.

    R 5 2

  4. snakemake-ont-bacterial-variants snakemake-ont-bacterial-variants Public

    A Snakemake workflow for the identification of variants in bacterial genomes using nanopore long-read sequencing.

    Python 5 2

  5. RNA_editing_analysis_pipeline RNA_editing_analysis_pipeline Public

    RNA editing pipeline / code for publication Wulff et al.

    Python 3

  6. snakemake-bacterial-riboseq snakemake-bacterial-riboseq Public

    Bacterial-Riboseq: A Snakemake workflow for the analysis of riboseq data in bacteria.

    Python 3

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