Voting-ensemble method framework
dependency: jsoup (https://github.com/jhy/jsoup/releases/tag/jsoup-1.6.2)
how to run:
java -Xmx1g -cp ./:<jsoup dir>/jsoup-1.6.2.jar Voting <threshold> <source xml dir> <output dir> <system1 dir> <system2 dir> ...
<jsoup dir>: the directory containing jsoup-1.6.2.jar
<threshold>: voting threshold, e.g., 1, 2
<source xml dir>: the directory containing XML files with tags (i2b2 2014 deid corpus format)
<output dir>: an output directory for voting ensemble
<system1 dir> ~ <systemn dir>: the directories containing the predictions of individual deidenfication systems
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Ensemble method framework
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MUSC-TBIC/ensemble
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