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update git submodule to make all notebooks functional on legacy branch
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@sophiamaedler
sophiamaedler committed Jan 27, 2025
1 parent 387b598 commit debfc58
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion examples/notebooks
Submodule notebooks updated 21 files
+2 −0 .gitignore
+0 −545 example_projects/_not_yet_functional_example_6/processing_notebook.ipynb
+0 −8 example_projects/example_1/config_example1.yml
+5 −4 example_projects/example_1/config_example1_WGASegmentation.yml
+596 −30 example_projects/example_1/processing_notebook.ipynb
+245 −253 example_projects/example_1/processing_notebook_cytosol_only.ipynb
+1,048 −0 example_projects/example_1/processing_notebook_cytosol_only_sharded.ipynb
+689 −34 example_projects/example_1/processing_notebook_sharded.ipynb
+0 −241 example_projects/example_1/processing_notebook_sharded_cytosol_only.ipynb
+27 −17 example_projects/example_2/config_example2.yml
+501 −32 example_projects/example_2/processing_notebook.ipynb
+526 −32 example_projects/example_2/processing_notebook_downsampling.ipynb
+28 −9 example_projects/example_4/config_example4.yml
+1,076 −35 example_projects/example_4/processing_notebook.ipynb
+6 −2 example_projects/example_5/config_example5.yml
+0 −0 example_projects/example_5/plate_layout.tsv
+0 −0 example_projects/example_6/config_example6.yml
+1,331 −0 example_projects/example_6/processing_notebook.ipynb
+246 −30 tutorials/Example_Notebook_TimeCourse_Project.ipynb
+401 −210 tutorials/example_notebook_segmentation_workflows.ipynb
+366 −785 tutorials/example_scPortrait_project.ipynb

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