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Merge pull request #18 from kamurani/patch-1
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Add docstring help to download af cif func
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ibludau authored Jan 8, 2024
2 parents 6215431 + 0b09207 commit 2d02723
Showing 1 changed file with 5 additions and 1 deletion.
6 changes: 5 additions & 1 deletion structuremap/processing.py
Original file line number Diff line number Diff line change
Expand Up @@ -46,6 +46,10 @@ def download_alphafold_cif(
download the structures.
out_folder : str
Path to the output folder.
out_format : str
The default file name of the cif files to be saved.
The brackets {} are replaced by a protein name from the proteins list.
Default is '{}.cif'.
alphafold_cif_url : str
The base link from where to download cif files.
The brackets {} are replaced by a protein name from the proteins list.
Expand Down Expand Up @@ -119,7 +123,7 @@ def download_alphafold_pae(
out_folder : str
Path to the output folder.
out_format : str
The default file name of the cif files to be saved.
The default file name of the pae files to be saved.
The brackets {} are replaced by a protein name from the proteins list.
Default is 'pae_{}.hdf'.
alphafold_pae_url : str
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