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1. clarify clarify Public

   Multi-level Graph Autoencoder (GAE) to clarify cell cell interactions and gene regulatory network inference from spatially resolved transcriptomics

   Jupyter Notebook 5

2. DiffRNAFold DiffRNAFold Public

   DiffRNAFold: RNA tertiary structure generation with latent space diffusion

   Jupyter Notebook 8 1

3. HierarchicalGAE HierarchicalGAE Public

   Graph Autoencoder architecture to learn Hierarchical and Task Agnostic Latent Representations of entire graphs

   Jupyter Notebook 1

4. ecDNA-Analytics ecDNA-Analytics Public

   Web platform that integrates the metaDetect and ecSeg with respective visualizations for extrachromosomal DNA analysis.

   HTML 3 1

5. CovidAutoEncoder CovidAutoEncoder Public

   Created and tested various autoencoder architectures (Convolutional, Variational, Linear) to learn latent representations of SARS-Cov-2 genomes and most importantly: the latent differences between …

   Jupyter Notebook 2

6. ATLEnvironmentalJustice ATLEnvironmentalJustice Public

   Web platform integrating an interactive map and additional information/data to highlight the disproportionate impact that climate change has on citizens of Atlanta and nearby counties.

   JavaScript 3 1