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@MindTheGap-ERC

MindTheGap: Quantifying the completeness of the stratigraphic record and its role in reconstructing the tempo and mode of evolution

European Research Council Starting Grant

Project logo: phylogenetic tree filled with text "Mind The Gap"

Quantifying the completeness of the stratigraphic record and its role in reconstructing the tempo and mode of evolution

Welcome to the GitHub organization of the project. We develop numerical models to study the structure of the geological record. Our goal is to understand how time, environmental and evolutionary events are represented in imperfect, gappy records and to use this knowledge to reconstruct the history of life and palaeoclimate. For more science, please visit the project's webpage.

We are funded by the European Union's European Research Council Starting Grant awarded to Emilia Jarochowska (2023-2028).

This project is a consortium composed by Utrecht University and the Netherlands eScience Center. Some software used and developed in this project is a continuation of AstroTOM.

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Funding information

Funded by the European Union (ERC, MindTheGap, StG project no 101041077). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union nor the granting authority can be held responsible for them. European Union and European Research Council logos

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  1. CarboKitten.jl CarboKitten.jl Public

    Julia implementation of carbonate platform model

    Julia 4

  2. admtools admtools Public

    Estimate Age-Depth Models and Transform Data

    R 4

  3. DarwinCAT DarwinCAT Public

    Shiny app visualizing the effects of carbonate stratigraphy on trait evolution

    R 2 1

  4. reactive-transport-model-for-limestone-marl-sequences reactive-transport-model-for-limestone-marl-sequences Public

    Forked from astro-turing/Integrating-diagenetic-equations-using-Python

    Integrating diagenetic equations using Python, inspired by LMA-Matlab, which was created by Niklas Hohmann

    Python 1

  5. LMA-Matlab LMA-Matlab Public

    Matlab implementation of the model by L'Heureux (2018) generating self-organized Limestone-Marl Alternations

    MATLAB 1

  6. preservation-orbital-forcing-carbonate-successions preservation-orbital-forcing-carbonate-successions Public

    Preservation of Orbital Forcing in Incomplete Carbonate Successions

    R 1

Repositories

Showing 10 of 35 repositories
  • CarboKitten.jl Public

    Julia implementation of carbonate platform model

    MindTheGap-ERC/CarboKitten.jl’s past year of commit activity
    Julia 4 GPL-3.0 0 23 1 Updated Nov 27, 2024
  • reactive-transport-model-for-limestone-marl-sequences Public Forked from astro-turing/Integrating-diagenetic-equations-using-Python

    Integrating diagenetic equations using Python, inspired by LMA-Matlab, which was created by Niklas Hohmann

    MindTheGap-ERC/reactive-transport-model-for-limestone-marl-sequences’s past year of commit activity
    Python 1 Apache-2.0 1 0 0 Updated Nov 26, 2024
  • nonparam_est_adm_supp Public

    Supplementary data and code for "Nonparametric estimation of age-depth models from sedimentological and stratigraphic data"

    MindTheGap-ERC/nonparam_est_adm_supp’s past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Nov 26, 2024
  • StratPal_ms_supp Public

    Supplementary code for the manuscript "StratPal: An R package for creating stratigraphic paleobiology modeling pipelines"

    MindTheGap-ERC/StratPal_ms_supp’s past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Nov 26, 2024
  • admtools Public

    Estimate Age-Depth Models and Transform Data

    MindTheGap-ERC/admtools’s past year of commit activity
    R 4 GPL-3.0 0 3 0 Updated Nov 25, 2024
  • StratPal Public

    R package for Stratigraphic Paleobiology

    MindTheGap-ERC/StratPal’s past year of commit activity
    R 1 Apache-2.0 0 0 0 Updated Nov 25, 2024
  • StratPal_data_prep Public Forked from NiklasHohmann/StratPal_ws_data_prep

    Data preparation for StratPal workshop and package

    MindTheGap-ERC/StratPal_data_prep’s past year of commit activity
    MATLAB 0 Apache-2.0 1 0 0 Updated Nov 11, 2024
  • MindTheGap-ERC.github.io Public

    Project webpage

    MindTheGap-ERC/MindTheGap-ERC.github.io’s past year of commit activity
    CSS 0 Apache-2.0 0 0 0 Updated Nov 6, 2024
  • CarboKittenData Public

    Auxiliary data files for use with CarboKitten

    MindTheGap-ERC/CarboKittenData’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Nov 6, 2024
  • StratPal_paleoverse_materials Public

    Materials and examples for the Paleoverse lecture "Building modeling pipelines for stratigraphic paleobiology in R" (Oct 31st 2024)

    MindTheGap-ERC/StratPal_paleoverse_materials’s past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Oct 31, 2024

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