Merge pull request #36 from MoseleyBioinformaticsLab/release

Adds workflow for publishing the next version of the package to PyPi

.github/workflows/build_documentation.yml → .github/workflows/documentation.yml

@@ -1,25 +1,18 @@
-name: Build Documentation
+name: Build and Publish Documentation
 
 on:
-  push:
-    branches:
-      - main
-  pull_request:
-    branches:
-      - main
+  workflow_call:
 
 jobs:
   build:
-
     runs-on: ubuntu-latest
-
     steps:
     - uses: actions/checkout@v4
       with:
         fetch-tags: true
 
     - name: Set up Python 3.11
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: '3.11'
 

.github/workflows/package_release.yml

@@ -0,0 +1,35 @@
+name: Release the Next Version of the Package
+
+on:
+  release:
+    types: [published]
+  workflow_dispatch:
+
+jobs:
+  deploy:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: ./.github/workflows/documentation.yml
+      - uses: actions/checkout@v4
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.x'
+      - name: Install dependencies
+        run: |
+          python3  -m pip install --upgrade pip
+          python3 -m pip install build
+          python3 -m pip install twine
+      - name: Build package
+        run: python -m build
+      - name: Check package
+        run: python3 -m twine check dist/*
+      - name: Publish package to Test-PyPi
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          password: ${{ secrets.TEST_PYPI_API_TOKEN }}
+          repository-url: https://test.pypi.org/legacy/
+      - name: Publish package to PyPi
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          password: ${{ secrets.PYPI_API_TOKEN }}

.github/workflows/main.yml → .github/workflows/pull_request.yml

@@ -1,4 +1,4 @@
-name: build
+name: Pull request
 
 on:
   push:
@@ -18,12 +18,12 @@ jobs:
     runs-on: ${{matrix.os}}
 
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v3
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
-    - name: Install testing environment and kegg_pull package
+    - name: Install testing environment and gpu-tracker package
       run: bash tests/install.sh
     - name: Test with pytest
       run: bash tests/run.sh