Skip to content

MsAlEhR/bio-protein-fold-recognition

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 

Repository files navigation

Protein-Fold-Recognition

Protein fold recognition plays a crucial role in discovering three-dimensional structure of proteins and protein functions. Several approaches have been employed for the prediction of protein folds. Some of these approaches are based on extracting features from protein sequences and using a strong classifier. Feature extraction techniques generally utilize syntactical-based information, evolutionary-based information and physicochemical-based information to extract features. In recent years, finding an efficient technique for integrating discriminate features have been received advancing attention. In this study, we integrate Auto-Cross-Covariance and Separated dimer evolutionary feature extraction methods. The results’ features are scored by Information gain to define and select several discriminated features. According to three benchmark datasets, DD, RDD ,and EDD, the results of the support vector machine show more than 6% improvement in accuracy on these benchmark datasets.[1]

[1] Here is the link of our paper : https://www.nature.com/articles/s41598-020-71172-x

About

Fold Protein Recognition

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published