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Reporting a warning when below coverage for GenomeScope and Smudgeplot #52

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mahesh-panchal opened this issue Sep 21, 2023 · 0 comments

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mahesh-panchal commented Sep 21, 2023

In general, having at least 15x coverage per homolog for GenomeScope and 25x coverage per homolog for Smudgeplot is required.

https://www.nature.com/articles/s41467-020-14998-3

If coverage is below this, we should display a warning of some kind.

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