New approach to implement action to export the .csv

.github/workflows/update-dalia-csv.yml

@@ -0,0 +1,48 @@
+name: Update DALIA CSV on Resource Change
+
+on:
+  pull_request:
+    paths:
+      - 'resources/nfdi4bioimage.yml' 
+
+jobs:
+  update-dalia-csv:
+    runs-on: ubuntu-latest
+    steps:
+      # Checkout repository
+      - name: Checkout repository
+        uses: actions/checkout@v2
+
+      # Set up Python environment
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: '3.x'
+
+      # Install dependencies
+      - name: Install dependencies
+        run: |
+          pip install -r requirements.txt
+          pip install nbconvert transformers torch
+          sudo apt-get install -y poppler-utils
+
+      # Execute the Notebook to export CSV in DALIA format
+      - name: Execute Jupyter Notebook
+        run: |
+          jupyter nbconvert --execute --inplace scripts/Export_to_DALIA.ipynb
+
+      # Commit and push changes if any file was updated
+      - name: Commit and push changes
+        run: |
+          git config --global user.name "github-actions[bot]"
+          git config --global user.email "github-actions[bot]@users.noreply.github.com"
+
+          git add .
+          git diff --staged --quiet || git commit -m "Auto-update CSV after modifying nfdi4bioimage.yml"
+
+          git pull --rebase origin ${{ github.head_ref }}
+
+          # Authenticate and push
+          git push https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/${{ github.repository }}.git HEAD:${{ github.head_ref }}
+
+