Fix FeniCSx tests #370
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| # .github/workflows/app.yaml | |
| name: ngsPETSc tests | |
| on: | |
| push: | |
| branches-ignore: | |
| - 'no-ci/*' | |
| schedule: | |
| - cron: '30 10 7,14,21,28 * *' | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| container: urzerbinati/ngspetsc:latest | |
| timeout-minutes: 3 | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Install ngsPETSc | |
| run: | | |
| python -m pip install . | |
| pip install pylint | |
| - name: Lint | |
| run: | | |
| make lint GITHUB_ACTIONS_FORMATTING=1 | |
| make lint_test GITHUB_ACTIONS_FORMATTING=1 | |
| ngsolve: | |
| runs-on: ubuntu-latest | |
| container: urzerbinati/ngspetsc:latest | |
| timeout-minutes: 30 | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Install ngsPETSc | |
| run: | | |
| python -m pip install . | |
| - name: Run test suite in serial | |
| run: | | |
| pytest -v tests/test_env.py | |
| pytest -v tests/test_vec.py | |
| pytest -v tests/test_mat.py | |
| pytest -v tests/test_plex.py | |
| pytest -v tests/test_ksp.py | |
| pytest -v tests/test_pc.py | |
| pytest -v tests/test_eps.py | |
| pytest -v tests/test_snes.py | |
| - name: Run test suite in parallel | |
| run: | | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_env.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_vec.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_mat.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_plex.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_ksp.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_pc.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_eps.py | |
| mpirun --allow-run-as-root -n 2 pytest -v --with-mpi tests/test_snes.py | |
| fenicsx: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: dolfinx/dolfinx:nightly | |
| options: --user root | |
| timeout-minutes: 50 | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Install pytest | |
| run: | | |
| pip install pytest --break-system-packages | |
| - name: Install Netgen and ngsPETSc | |
| run: | | |
| pip install netgen-mesher --break-system-packages | |
| export PYTHONPATH=$PYTHONPATH:/usr/local/lib/python3.10/site-packages | |
| echo "PYTHONPATH=$PYTHONPATH" >> $GITHUB_ENV | |
| NGSPETSC_NO_INSTALL_REQUIRED=ON pip install -e . --break-system-packages | |
| - name: Run test suite in serial | |
| run: | | |
| pytest -v tests/test_fenicsx.py | |
| firedrake: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: firedrakeproject/firedrake-vanilla:latest | |
| options: --user root | |
| timeout-minutes: 50 | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Add SLEPc to vanilla Firedrake | |
| run: | | |
| . /home/firedrake/firedrake/bin/activate | |
| cp -R $SLEPC_DIR/src/binding/slepc4py $VIRTUAL_ENV/src | |
| pip install --no-build-isolation --no-binary mpi4py,randomgen,numpy --no-deps $VIRTUAL_ENV/src/slepc4py/ | |
| - name: Install Netgen and ngsPETSc | |
| run: | | |
| . /home/firedrake/firedrake/bin/activate | |
| pip install netgen-mesher | |
| pip install xdist pytest-timeout ipympl | |
| NGSPETSC_NO_INSTALL_REQUIRED=ON pip install . | |
| - name: Run part of the Firedrake test suite | |
| run: | | |
| . /home/firedrake/firedrake/bin/activate | |
| cd $VIRTUAL_ENV/src/firedrake | |
| python -m pytest \ | |
| --timeout=1800 \ | |
| --timeout-method=thread \ | |
| -o faulthandler_timeout=1860 \ | |
| -n 4 --dist worksteal \ | |
| -v tests/regression/test_netgen.py tests/demos tests/multigrid/test_netgen_gmg.py |