Staging public #25

	# # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
	# # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
	---
	name: Deploy Toolkit

	on:
	push:
	branches: [main, master]
	pull_request:
	branches: [main, master]
	release:
	types: [published]
	workflow_dispatch:

	jobs:
	deploy_toolkit:
	runs-on: ubuntu-latest

	# Only restrict concurrency for non-PR jobs
	concurrency:
	group: bookdown-${{ github.event_name != 'pull_request' \|\| github.run_id }}

	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

	permissions:
	contents: write

	steps:
	- uses: actions/checkout@v4

	- uses: r-lib/actions/setup-pandoc@v2

	- uses: r-lib/actions/setup-r@v2
	with:
	use-public-rspm: true

	- name: Install libudunits2 and libmagick
	run: \|
	sudo apt-get install -y libudunits2-dev libgdal-dev
	sudo apt-get install libmagick++-dev

	- name: Build site
	run: \|
	install.packages(c(
	"bookdown",
	"rmarkdown",
	"plotly",
	"shiny",
	"tidycensus",
	"tidyverse",
	"viridis",
	"ggmap",
	"ggplot2",
	"maps",
	"dplyr",
	"knitr",
	"latticeExtra",
	"pals",
	"classInt",
	"sf",
	"udunits2",
	"tmap",
	"lubridate",
	"gifski",
	"magick",
	"cowplot",
	"BiocManager"
	),
	dependencies = TRUE
	)
	BiocManager::install("Biobase")
	bookdown::render_book()
	shell: Rscript {0}

	- name: Deploy to GitHub pages 🚀
	if: github.event_name != 'pull_request'
	uses: JamesIves/[email protected]
	with:
	clean: false
	branch: gh-pages
	folder: docs

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