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Staging public

Staging public #28

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures?
# Start at https://github.com/r-lib/actions#where-to-find-help
---
name: Check Render Bookdown
on:
pull_request:
jobs:
check_render_bookdown:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
- name: Install libudunits2 and libmagick
run: |
sudo apt-get install -y libudunits2-dev libgdal-dev
sudo apt-get install libmagick++-dev
- uses: r-lib/actions/setup-r-dependencies@v2
with:
packages: |
any::testthat
any::bookdown
any::covr
- name: Render Bookdown
run: |
install.packages(c(
"testthat",
"rsconnect",
"bookdown",
"rmarkdown",
"plotly",
"shiny",
"tidycensus",
"tidyverse",
"viridis",
"ggmap",
"ggplot2",
"maps",
"dplyr",
"knitr",
"latticeExtra",
"pals",
"classInt",
"sf",
"udunits2",
"tmap",
"lubridate",
"gifski",
"magick",
"cowplot",
"BiocManager"
),
dependencies = TRUE
)
BiocManager::install("Biobase")
covr::environment_coverage(
test_files = "tests/test-render_bookdown.R"
)
shell: Rscript {0}