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Dev #372

Merged
merged 27 commits into from
Oct 2, 2024
Merged

Dev #372

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e3f9539
export convert_cv_index_rset; skip_on_ci; expect_warning
mitchellmanware Sep 24, 2024
106e194
Merge pull request #360 from NIEHS/mm-tests-0820
kyle-messier Sep 25, 2024
d922834
rebasing + gitignore for tokens
kyle-messier Sep 30, 2024
819dcd2
remove old test data
kyle-messier Sep 30, 2024
524fcd7
Merge pull request #365 from NIEHS/pre-dev-fix
kyle-messier Sep 30, 2024
fc275d2
set up container, def, and archive old bash scripts
kyle-messier Oct 1, 2024
bad244e
add dev to branches triggering GH actions
kyle-messier Oct 1, 2024
45a2170
Merge pull request #368 from NIEHS/container-01
kyle-messier Oct 1, 2024
30b0f89
def files, bash scipts for containers, testing yaml
kyle-messier Oct 1, 2024
4c42f5a
fixing [on] typo
kyle-messier Oct 1, 2024
969565b
GH action path correction
kyle-messier Oct 1, 2024
66c65aa
name change
kyle-messier Oct 1, 2024
27d64e3
def file was wrong name
kyle-messier Oct 1, 2024
f4db895
rel path update for container build
kyle-messier Oct 1, 2024
89a2f95
path fix, fakeroot
kyle-messier Oct 1, 2024
8af11cd
path change for test functions
kyle-messier Oct 1, 2024
7afc578
cache fixing attempt
kyle-messier Oct 1, 2024
ab3dfb7
path fix attempts
kyle-messier Oct 1, 2024
775c98d
change order of yaml names to include new R test file in mnt
kyle-messier Oct 1, 2024
691aa16
remove _targets/ path from mount
kyle-messier Oct 1, 2024
ddee948
cache updating and check sections
kyle-messier Oct 1, 2024
ee9da0b
test cache of sif
kyle-messier Oct 1, 2024
401a78a
Merge branch 'dev' into container-01
kyle-messier Oct 1, 2024
e460622
Merge pull request #369 from NIEHS/container-01
kyle-messier Oct 1, 2024
51a6733
_targets.R, test and run bash scripts
kyle-messier Oct 2, 2024
8790b40
Merge branch 'dev' into container-01
kyle-messier Oct 2, 2024
7d17aba
Merge pull request #370 from NIEHS/container-01
kyle-messier Oct 2, 2024
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add dev to branches triggering GH actions
kyle-messier committed Oct 1, 2024

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commit bad244e022f6b108614b42e67ae91a0fd6eee8a4
4 changes: 2 additions & 2 deletions .github/workflows/check-standard.yaml
Original file line number Diff line number Diff line change
@@ -2,9 +2,9 @@
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
branches: [main, master, dev]
pull_request:
branches: [main, master]
branches: [main, master, dev]

name: R-CMD-check

4 changes: 2 additions & 2 deletions .github/workflows/lint.yaml
Original file line number Diff line number Diff line change
@@ -2,9 +2,9 @@
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
branches: [main, master, dev]
pull_request:
branches: [main, master]
branches: [main, master, dev]

name: lint

4 changes: 2 additions & 2 deletions .github/workflows/pkgdown.yaml
Original file line number Diff line number Diff line change
@@ -2,9 +2,9 @@
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
branches: [main, master, dev]
pull_request:
branches: [main, master]
branches: [main, master, dev]
release:
types: [published]
workflow_dispatch:
4 changes: 2 additions & 2 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
@@ -3,9 +3,9 @@
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
branches: [main, master, dev]
pull_request:
branches: [main, master]
branches: [main, master, dev]

name: test-coverage-local