add __name__ == __main__ to all scripts (improves sphinx behavior)

NMRLipids · Sep 11, 2024 · ddca537 · ddca537
1 parent b5f992b
commit ddca537
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Showing 13 changed files with 946 additions and 933 deletions.
diff --git a/Scripts/AnalyzeDatabank/NMRPCA_timerelax.py b/Scripts/AnalyzeDatabank/NMRPCA_timerelax.py
@@ -23,19 +23,20 @@
 from DatabankLib.analyze import computeNMRPCA
 
 
-systems = initialize_databank()
-resDict = {DatabankLib.RCODE_COMPUTED: 0, 
-           DatabankLib.RCODE_SKIPPED: 0,
-           DatabankLib.RCODE_ERROR: 0}
-
-for system in systems:
-    logger.info("System title: " + system['SYSTEM'])
-    logger.info("System path: " + system['path'])
-    res = computeNMRPCA(system)
-    resDict[res] += 1
-
-print(f"""
-COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
- SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
-   ERROR: {resDict[DatabankLib.RCODE_ERROR]}
-""")
+if __name__ == "__main__":
+        systems = initialize_databank()
+        resDict = {DatabankLib.RCODE_COMPUTED: 0, 
+                DatabankLib.RCODE_SKIPPED: 0,
+                DatabankLib.RCODE_ERROR: 0}
+
+        for system in systems:
+            logger.info("System title: " + system['SYSTEM'])
+            logger.info("System path: " + system['path'])
+            res = computeNMRPCA(system)
+            resDict[res] += 1
+
+        print(f"""
+        COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
+        SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
+        ERROR: {resDict[DatabankLib.RCODE_ERROR]}
+        """)
diff --git a/Scripts/AnalyzeDatabank/calcAPL.py b/Scripts/AnalyzeDatabank/calcAPL.py
@@ -12,19 +12,20 @@
 from DatabankLib.analyze import computeAPL
 
 
-systems = initialize_databank()
-resDict = {DatabankLib.RCODE_COMPUTED: 0, 
-           DatabankLib.RCODE_SKIPPED: 0,
-           DatabankLib.RCODE_ERROR: 0}
+if __name__ == "__main__":
+    systems = initialize_databank()
+    resDict = {DatabankLib.RCODE_COMPUTED: 0, 
+              DatabankLib.RCODE_SKIPPED: 0,
+              DatabankLib.RCODE_ERROR: 0}
 
-for system in systems:
-    logger.info("System title: " + system['SYSTEM'])
-    logger.info("System path: " + system['path'])
-    res = computeAPL(system)
-    resDict[res] += 1
+    for system in systems:
+        logger.info("System title: " + system['SYSTEM'])
+        logger.info("System path: " + system['path'])
+        res = computeAPL(system)
+        resDict[res] += 1
 
-print(f"""
-COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
- SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
-   ERROR: {resDict[DatabankLib.RCODE_ERROR]}
-""")
+    print(f"""
+    COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
+    SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
+      ERROR: {resDict[DatabankLib.RCODE_ERROR]}
+    """)
diff --git a/Scripts/AnalyzeDatabank/calcOrderParameters.py b/Scripts/AnalyzeDatabank/calcOrderParameters.py
@@ -12,19 +12,20 @@
 from DatabankLib.analyze import computeOP
 
 
-systems = initialize_databank()
-resDict = {DatabankLib.RCODE_COMPUTED: 0, 
-           DatabankLib.RCODE_SKIPPED: 0,
-           DatabankLib.RCODE_ERROR: 0}
+if __name__ == "__main__":
+    systems = initialize_databank()
+    resDict = {DatabankLib.RCODE_COMPUTED: 0, 
+              DatabankLib.RCODE_SKIPPED: 0,
+              DatabankLib.RCODE_ERROR: 0}
 
-for system in systems:
-    logger.info("System title: " + system['SYSTEM'])
-    logger.info("System path: " + system['path'])
-    res = computeOP(system)
-    resDict[res] += 1
+    for system in systems:
+        logger.info("System title: " + system['SYSTEM'])
+        logger.info("System path: " + system['path'])
+        res = computeOP(system)
+        resDict[res] += 1
 
-print(f"""
-COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
- SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
-   ERROR: {resDict[DatabankLib.RCODE_ERROR]}
-""")
+    print(f"""
+    COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
+    SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
+      ERROR: {resDict[DatabankLib.RCODE_ERROR]}
+    """)
diff --git a/Scripts/AnalyzeDatabank/calc_FormFactors.py b/Scripts/AnalyzeDatabank/calc_FormFactors.py
@@ -11,20 +11,20 @@
 from DatabankLib.core import initialize_databank
 from DatabankLib.analyze import computeFF
 
+if __name__ == "__main__":
+    systems = initialize_databank()
+    resDict = {DatabankLib.RCODE_COMPUTED: 0, 
+              DatabankLib.RCODE_SKIPPED: 0,
+              DatabankLib.RCODE_ERROR: 0}
 
-systems = initialize_databank()
-resDict = {DatabankLib.RCODE_COMPUTED: 0, 
-           DatabankLib.RCODE_SKIPPED: 0,
-           DatabankLib.RCODE_ERROR: 0}
+    for system in systems:
+        logger.info("System title: " + system['SYSTEM'])
+        logger.info("System path: " + system['path'])
+        res = computeFF(system)
+        resDict[res] += 1
 
-for system in systems:
-    logger.info("System title: " + system['SYSTEM'])
-    logger.info("System path: " + system['path'])
-    res = computeFF(system)
-    resDict[res] += 1
-
-print(f"""
-COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
- SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
-   ERROR: {resDict[DatabankLib.RCODE_ERROR]}
-""")
+    print(f"""
+    COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
+    SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
+      ERROR: {resDict[DatabankLib.RCODE_ERROR]}
+    """)
diff --git a/Scripts/AnalyzeDatabank/calc_thickness.py b/Scripts/AnalyzeDatabank/calc_thickness.py
@@ -12,19 +12,20 @@
 from DatabankLib.analyze import computeTH
 
 
-systems = initialize_databank()
-resDict = {DatabankLib.RCODE_COMPUTED: 0, 
-           DatabankLib.RCODE_SKIPPED: 0,
-           DatabankLib.RCODE_ERROR: 0}
+if __name__ == "__main__":
+    systems = initialize_databank()
+    resDict = {DatabankLib.RCODE_COMPUTED: 0, 
+              DatabankLib.RCODE_SKIPPED: 0,
+              DatabankLib.RCODE_ERROR: 0}
 
-for system in systems:
-    logger.info("System title: " + system['SYSTEM'])
-    logger.info("System path: " + system['path'])
-    res = computeTH(system)
-    resDict[res] += 1
+    for system in systems:
+        logger.info("System title: " + system['SYSTEM'])
+        logger.info("System path: " + system['path'])
+        res = computeTH(system)
+        resDict[res] += 1
 
-print(f"""
-COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
- SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
-   ERROR: {resDict[DatabankLib.RCODE_ERROR]}
-""")
+    print(f"""
+    COMPUTED: {resDict[DatabankLib.RCODE_COMPUTED]}
+    SKIPPED: {resDict[DatabankLib.RCODE_SKIPPED]}
+      ERROR: {resDict[DatabankLib.RCODE_ERROR]}
+    """)
diff --git a/Scripts/AnalyzeDatabank/template.py b/Scripts/AnalyzeDatabank/template.py
@@ -9,9 +9,11 @@
 sys.path.append(os.path.abspath(os.path.join(os.path.dirname(__file__), '..')))
 from DatabankLib.databankLibrary import initialize_databank, lipids_dict
 
-systems = initialize_databank()
 
-for system in systems:
-    print(system)
-
+if __name__ == "__main__":
+    systems = initialize_databank()
+
+    for system in systems:
+        print(system)
+