Skip to content

Merge pull request #86 from NOAA-EDAB/dev #286

Merge pull request #86 from NOAA-EDAB/dev

Merge pull request #86 from NOAA-EDAB/dev #286

Workflow file for this run

on:
push:
paths:
- '.github/workflows/tests.yml'
- 'R/*'
- 'tests/testthat/*'
- 'README.md'
- 'DESCRIPTION'
pull_request:
paths:
- '.github/workflows/tests.yml'
- 'R/*'
- 'tests/testthat/*'
name: Unit-Tests
jobs:
# build:
# runs-on: ubuntu-latest
# steps:
# - uses: actions/checkout@v2
# - uses: r-lib/actions/setup-r@v2
# - uses: r-lib/actions/setup-pandoc@v2
# - name: Install dependencies
# run: Rscript -e "install.packages(c('testthat', 'tidyverse', 'here'))"
# - name: Run tests
# run: Rscript -e "source('tests/testthat.R')"
Unit-Tests:
runs-on: ${{matrix.config.os}}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
#os: [macos-latest, ubuntu-latest, windows-latest]
#os: [ubuntu-latest]
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
# R_REMOTES_NO_ERRORS_FROM_WARNINGS: false
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
# with:
# fetch-depth: 0
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
# r-version: '4.3.1'
- uses: r-lib/actions/setup-r-dependencies@v2
- name: Install command line packages
if: runner.os == 'Linux'
run: |
sudo apt update
sudo apt-get install libcurl4-openssl-dev libgit2-dev
- name: Install dependencies
#run: Rscript -e "install.packages(c('remotes','testthat', 'tidyverse', 'here'))"
run: |
install.packages(c('usethis','remotes','testthat','tidyverse','here','rmarkdown','qpdf','distillery','ggpubr','rlist'))
remotes::install_github("NOAA-EDAB/Rpath")
shell: Rscript {0}
- name: Run tests
#run: Rscript -e "source('tests/testthat.R')"
run: |
source(here::here("data-raw/REcosystem.R"))
source(here::here("tests/testthat.R"))
shell: Rscript {0}
# - name: commit data files
# run: |
# git config user.name github-actions
# git config user.email [email protected]
# file.copy('here::here("tests/testthat/Rplots.pdf")",to=here::here("inst/extdata/Rplots.pdf"))
# git add inst/extdata/Rplots.pdf
# git commit -m "automated commit from testthat yml"
# git push