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andybeet committed Mar 15, 2024
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4 changes: 2 additions & 2 deletions HMS_species_distribution.html
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<li>wlat=latitude of centroid.</li>
<li>wlon=longitude of centroid.</li>
</ol>
<div class="datatables html-widget html-fill-item" id="htmlwidget-9433f2b1f4d7b6516f23" style="width:100%;height:auto;"></div>
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<div class="datatables html-widget html-fill-item" id="htmlwidget-5b743289bce995da92ed" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-5b743289bce995da92ed">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4","5","6","7","8","9","10","11","12","13","14","15","16","17","18","19","20","21","22","23","24","25","26","27","28","29","30","31","32","33","34","35","36","37","38","39","40","41","42","43","44","45","46","47","48","49","50","51","52"],["wlat_Fin whale_spring","wlon_Fin whale_spring","wlat_Risso's dolphin_spring","wlon_Risso's dolphin_spring","wlat_Common dolphin_spring","wlon_Common dolphin_spring","wlat_Sperm whale_spring","wlon_Sperm whale_spring","wlat_Atlantic spotted dolphin_spring","wlon_Atlantic spotted dolphin_spring","wlat_Short-finned pilot whale_spring","wlon_Short-finned pilot whale_spring","wlat_Striped dolphin_spring","wlon_Striped dolphin_spring","wlat_Sei whale_summer","wlon_Sei whale_summer","wlat_Fin whale_summer","wlon_Fin whale_summer","wlat_Short-finned pilot whale_summer","wlon_Short-finned pilot whale_summer","wlat_Risso's dolphin_summer","wlon_Risso's dolphin_summer","wlat_Common dolphin_summer","wlon_Common dolphin_summer","wlat_Sperm whale_summer","wlon_Sperm whale_summer","wlat_Fin whale_fall","wlon_Fin whale_fall","wlat_Short-finned pilot whale_fall","wlon_Short-finned pilot whale_fall","wlat_Risso's dolphin_fall","wlon_Risso's dolphin_fall","wlat_Common dolphin_fall","wlon_Common dolphin_fall","wlat_Sperm whale_fall","wlon_Sperm whale_fall","wlat_Striped dolphin_fall","wlon_Striped dolphin_fall","wlat_Atlantic spotted dolphin_winter","wlon_Atlantic spotted dolphin_winter","wlat_Harbor porpoise_winter","wlon_Harbor porpoise_winter","wlat_Minke whale_winter","wlon_Minke whale_winter","wlat_Short-finned pilot whale_winter","wlon_Short-finned pilot whale_winter","wlat_Risso's dolphin_winter","wlon_Risso's dolphin_winter","wlat_Common dolphin_winter","wlon_Common dolphin_winter","wlat_Sperm whale_winter","wlon_Sperm whale_winter"],["NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <th>Units<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1},{"name":"Units","targets":2}],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Published Methods</label></li>
</ul>
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4 changes: 2 additions & 2 deletions SAV.html
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<li>Name: Year; Definition: SAV growing season; year. 2) Name: Tidal Fresh Total; Definition: SAV area in the Tidal Fresh Zone; Units: acres. 3) Name: Oligohaline Total</li>
</ol>
<p>; Definition: SAV area in the Oligohaline Zone; Units: acres. 4) Name: Mesohaline Total; Definition: SAV area in the Mesohaline Zone; Units: acres. 5) Name: Polyhaline Total; Definition: SAV area in the Polyhaline Zone; Units: acres. 5) Name: Baywide Total; Definition: Total SAV area in Chesapeake Bay; Units: acres.</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-ae27264ae40c1966c289" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-ae27264ae40c1966c289">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4","5"],["Tidal","Oligohaline","Mesohaline","Polyhaline","Baywide"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1}],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-c6e6597aeec6465ca038" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-c6e6597aeec6465ca038">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4","5"],["Tidal","Oligohaline","Mesohaline","Polyhaline","Baywide"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1}],"order":[],"autoWidth":false,"orderClasses":false}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Published Methods</label></li>
</ul>
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4 changes: 2 additions & 2 deletions abc_acl.html

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4 changes: 2 additions & 2 deletions aggregate_biomass.html

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4 changes: 2 additions & 2 deletions aquaculture.html
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<p>Pieces: number of oysters produced (all regions)</p>
<p>Shellfish lease Acres: area used for shellfish production (New England states only), acres</p>
<p>Production/Acre: Pieces divided by Shellfish lease acres (New England states only)</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-23491acd3d3687ba18d4" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-23491acd3d3687ba18d4">{"x":{"filter":"none","vertical":false,"data":[["1","2","3"],["Pieces","Shellfish lease Acres","Production/Acre"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-e1acadbf0b96e784ae90" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-e1acadbf0b96e784ae90">{"x":{"filter":"none","vertical":false,"data":[["1","2","3"],["Pieces","Shellfish lease Acres","Production/Acre"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Syntheses of published information</label></li>
</ul>
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4 changes: 2 additions & 2 deletions bennet.html
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<li><p>Price Indicator (PI): Change in Revenue compared to the base time period in deflated dollars attributed to changes in prices for species harvested.</p></li>
<li><p>Bennet Indicator (BI): The Sum of a Volume Indicator (VI) and Price Indicator (PI) in inflation adjusted dollars, which is equal to the change in revenue.</p></li>
</ol>
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<div class="datatables html-widget html-fill-item" id="htmlwidget-ac27d7efc1dccd4d02f4" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-ac27d7efc1dccd4d02f4">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4","5","6","7","8","9","10","11","12","13","14","15"],["Apex Predator Volume Indicator - Bennet","Benthivore Volume Indicator - Bennet","Benthos Volume Indicator - Bennet","Other Volume Indicator - Bennet","Piscivore Volume Indicator - Bennet","Planktivore Volume Indicator - Bennet","Apex Predator Price Indicator - Bennet","Benthivore Price Indicator - Bennet","Benthos Price Indicator - Bennet","Other Price Indicator - Bennet","Piscivore Price Indicator - Bennet","Planktivore Price Indicator - Bennet","Total Volume Indicator - Bennet","Total Price Index - Bennet","Total Revenue Change - Bennet"],["Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S.","Million Dollars U.S."]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <th>Units<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1},{"name":"Units","targets":2}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Database pull with analysis</label></li>
</ul>
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4 changes: 2 additions & 2 deletions bottom_temp.html
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<p><strong>ecodata name</strong>: <code><a href="https://rdrr.io/pkg/ecodata/man/bottom_temp.html">ecodata::bottom_temp</a></code></p>
<p><strong>Variable definitions</strong></p>
<p>Tbot_anom; Definition: Bottom temperature anomaly; Units: degree Celsius</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-3c7a77938bada81dc4e1" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-3c7a77938bada81dc4e1">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4"],["bottom temp anomaly in situ","reference bt in situ (1981-2010)","reference sst in situ (1981-2010)","sst anomaly in situ"],["degreesC","degreesC","degreesC","degreesC"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <th>Units<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1},{"name":"Units","targets":2}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-910d4efe40228d5afde7" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-910d4efe40228d5afde7">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4"],["bottom temp anomaly in situ","reference bt in situ (1981-2010)","reference sst in situ (1981-2010)","sst anomaly in situ"],["degreesC","degreesC","degreesC","degreesC"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <th>Units<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1},{"name":"Units","targets":2}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Extensive analysis, not yet published</label></li>
</ul>
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4 changes: 2 additions & 2 deletions bottom_temp_comp.html
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<p>Source: ROMS (bias-corrected ROMS-NWA bottom temperature <span class="citation">[<a href="#ref-dupontavice_ocean_2022">59</a>]</span>), GLORYS (CMEM’s GLORYS12V1 global reanalysis bottom temperature), PSY (CMEM’s PSY global forecast bottom temperature)</p>
<p>bt_temp : mean bottom temperature for each year/season across entire EPU
ref_bt: bottom temperature climatology for season/EPU based on 1990-2020</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-461119012bdba956e334" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-461119012bdba956e334">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4","5"],["Annual_Bottom Temp","Fall_Bottom Temp Anomaly","Spring_Bottom Temp Anomaly","Summer_Bottom Temp Anomaly","Winter_Bottom Temp Anomaly"],["degree C","degree C","degree C","degree C","degree C"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <th>Units<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1},{"name":"Units","targets":2}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-a651a3aed5b79318bd53" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-a651a3aed5b79318bd53">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4","5"],["Annual_Bottom Temp","Fall_Bottom Temp Anomaly","Spring_Bottom Temp Anomaly","Summer_Bottom Temp Anomaly","Winter_Bottom Temp Anomaly"],["degree C","degree C","degree C","degree C","degree C"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <th>Units<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1},{"name":"Units","targets":2}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Syntheses of published information</label></li>
<li><label><input type="checkbox" checked>Database pull with analysis</label></li>
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4 changes: 2 additions & 2 deletions bottom_temp_seasonal_gridded.html
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<li>Variable: season</li>
<li>Value: bottom temperature (degrees Celcius)</li>
</ul>
<div class="datatables html-widget html-fill-item" id="htmlwidget-50fd51f01d238b48d83a" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-50fd51f01d238b48d83a">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4"],["winter","spring","summer","fall"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<div class="datatables html-widget html-fill-item" id="htmlwidget-1846475116cb0c9a8dcd" style="width:100%;height:auto;"></div>
<script type="application/json" data-for="htmlwidget-1846475116cb0c9a8dcd">{"x":{"filter":"none","vertical":false,"data":[["1","2","3","4"],["winter","spring","summer","fall"]],"container":"<table class=\"display\">\n <thead>\n <tr>\n <th> <\/th>\n <th>Var<\/th>\n <\/tr>\n <\/thead>\n<\/table>","options":{"columnDefs":[{"orderable":false,"targets":0},{"name":" ","targets":0},{"name":"Var","targets":1}],"order":[],"autoWidth":false,"orderClasses":false},"selection":{"mode":"multiple","selected":null,"target":"row","selectable":null}},"evals":[],"jsHooks":[]}</script><p><strong>Indicator Category</strong>:</p>
<ul class="task-list">
<li><label><input type="checkbox" checked>Published Methods</label></li>
<li><label><input type="checkbox" checked>Syntheses of published information</label></li>
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