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Merge pull request #331 from dmgav/srx-shapes-issue #314

Merge pull request #331 from dmgav/srx-shapes-issue

Merge pull request #331 from dmgav/srx-shapes-issue #314

Workflow file for this run

name: Tests
on:
push:
pull_request:
jobs:
build:
env:
DISPLAY: ":99.0" # arbitrary
# GSETTINGS_SCHEMA_DIR_CONDA_BACKUP is somehow related to the following issue https://github.com/conda/conda/issues/9966
GSETTINGS_SCHEMA_DIR_CONDA_BACKUP: "/usr/share/miniconda/envs/testenv/share/glib-2.0/schemas"
strategy:
matrix:
host-os: ["ubuntu-latest", "macos-latest", "windows-latest"]
python-version: ["3.10", "3.11"]
numpy-version: ["1.26"]
pyqt-version: ["5.15"]
include:
- host-os: "ubuntu-latest"
conda-mamba: "mamba"
- host-os: "macos-latest"
conda-mamba: "mamba"
- host-os: "windows-latest"
conda-mamba: "mamba"
fail-fast: false
runs-on: ${{ matrix.host-os }}
# Note: Services are based on docker containers and would run only on Linux
# Leave the item here for reference.
# services:
# mongodb:
# image: mongo
# ports:
# - 27017:27017
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
# This step is not expected to influence the test, since the test is run in Conda environment
python-version: 3.9
- uses: conda-incubator/setup-miniconda@v2
with:
# miniforge-variant: Mambaforge
miniforge-version: latest
channels: conda-forge
channel-priority: flexible
auto-update-conda: true
show-channel-urls: true
allow-softlinks: true
auto-activate-base: false
activate-environment: testenv
use-only-tar-bz2: false
- name: Install Linux libraries
if: runner.os == 'Linux'
run: |
sudo apt-get update
sudo apt-get install -y xvfb herbstluftwm
- name: Start 'xvfb'
if: runner.os == 'Linux'
run: |
sudo /sbin/start-stop-daemon --start --pidfile /tmp/custom_xvfb_99.pid --make-pidfile --background --exec /usr/bin/Xvfb -- :99 -screen 0 1920x1200x24 -ac +extension GLX +render -noreset
sleep 3
- name: Start 'herbstluftwm'
if: runner.os == 'Linux'
run: |
herbstluftwm &
sleep 1
- name: Install Conda packages
run: |
set -vxeo pipefail
# conda install -y -n base --override-channels -c conda-forge mamba 'python_abi=*=*cp*'
${{ matrix.conda-mamba }} install -y \
python=${{ matrix.python-version }} \
numpy=${{ matrix.numpy-version }} \
pyqt=${{ matrix.pyqt-version }} \
numba \
pip \
'scikit-beam>=0.0.24' \
-c conda-forge
conda list
pip list
- name: Install Conda packages (Windows and OSX)
if: runner.os != 'Linux'
run: |
set -vxeo pipefail
# There are issues in building wheels for pystackreg>0.2.2 on OSX, so install pystackreg from CF
${{ matrix.conda-mamba }} install -y pystackreg -c conda-forge
conda list
pip list
- name: Install PyPI packages
run: |
set -vxeuo pipefail
${{ matrix.conda-mamba }} install -y pystackreg -c conda-forge # Some issue with pystackreg from PyPI
# pip install --upgrade pip setuptools
pip install codecov
pip install -r requirements.txt
pip install -r requirements-dev.txt
pip install .
conda list
pip list
python --version
- name: Test with pytest
run: |
set -vxeuo pipefail
coverage run -m pytest -vvv
coverage report