Fix linux installation instructions #530
Annotations
10 errors and 5 warnings
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Run tests:
tests/e2e/pipelines.test.ts#L73
AssertionError: expected [ …(15) ] to deeply equal [ …(15) ]
- Expected
+ Received
Array [
Object {
"name": "SLEAP",
"success": true,
},
Object {
+ "error": "Source data not available for this pipeline.",
"name": "DeepLabCut",
- "success": true,
},
Object {
"name": "BrukerTiffMultiChannelSinglePlane",
"success": true,
},
Object {
"name": "MEArec",
"success": true,
},
Object {
"name": "IntanSingleFileRecording",
"success": true,
},
Object {
"name": "CellExplorerSortingOnly",
"success": true,
},
Object {
"name": "CellExplorerUnits",
"success": true,
},
Object {
"name": "CellExplorer",
"success": true,
},
Object {
"name": "TDT",
"success": true,
},
Object {
"name": "ScanImage_SinglePlane_SingleChannel",
"success": true,
},
Object {
"name": "Caiman_SinglePlane_SingleChannel",
"success": true,
},
Object {
"name": "Suite2P_SinglePlane_SingleChannel",
"success": true,
},
Object {
"name": "SpikeGLXConverter-Phy",
"success": true,
},
Object {
"name": "SpikeGLX_v1_SingleProbe_AP",
"success": true,
},
Object {
"name": "SpikeGLX-Phy",
"success": true,
},
]
❯ tests/e2e/pipelines.test.ts:73:22
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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|
Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Run tests:
tests/e2e/utils.ts#L43
TypeError: Cannot read properties of null (reading 'children')
❯ evaluate evaluate at Module.evaluate (/Users/runner/work/nwb-guide/nwb-guide/tests/e2e/utils.ts:39:81), <anonymous>:1:89
❯ ExecutionContext.#evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:449:13
❯ ExecutionContext.evaluate node_modules/puppeteer-core/src/cdp/ExecutionContext.ts:292:12
❯ IsolatedWorld.evaluate node_modules/puppeteer-core/src/cdp/IsolatedWorld.ts:194:12
❯ CdpFrame.evaluate node_modules/puppeteer-core/src/api/Frame.ts:484:12
❯ CdpPage.evaluate node_modules/puppeteer-core/src/api/Page.ts:2218:12
❯ Module.evaluate tests/e2e/utils.ts:43:46
❯ tests/e2e/pipelines.test.ts:107:27
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Get behavior_testing_data current head hash
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Get ophys_testing_data current head hash
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Set up conda
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Get ephy_testing_data current head hash
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Archive Pipeline Test Screenshots
No files were found with the provided path: docs/assets/tutorials/test-pipelines. No artifacts will be uploaded.
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