Merge branch 'main' into CellExplorerRecordingInterface

.github/workflows/Build-and-deploy-mac.yml

@@ -45,6 +45,7 @@ jobs:
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
           # Currently this is set to Ryan's Apple ID and app-specific password
+          teamId: ${{ secrets.APPLE_TEAM_ID }}
           appleId: ${{ secrets.APPLE_ID }}
           appleIdPassword: ${{ secrets.APPLE_PASSWORD }}
         run: npm run deploy:mac

.github/workflows/add-to-catalystneuro-dashboard.yml

@@ -0,0 +1,19 @@
+name: Add Issue or Pull Request to Dashboard
+
+on:
+  issues:
+    types:
+      - opened
+  pull_request:
+    types:
+      - opened
+
+jobs:
+  add-to-project:
+    name: Add issue or pull request to project
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/[email protected]
+        with:
+          project-url: https://github.com/orgs/catalystneuro/projects/3
+          github-token: ${{ secrets.PROJECT_TOKEN }}

.github/workflows/chromatic.yml

@@ -1,9 +1,13 @@
-name: "Chromatic Publish"
+name: Chromatic
 
-on: workflow_dispatch
+on:
+  workflow_dispatch:
+  pull_request_review:
+    types: [submitted]
 
 jobs:
   test:
+    if: github.event_name == 'workflow_dispatch' || (github.event_name == 'pull_request_review' && github.event.review.state == 'approved')
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v1

.pre-commit-config.yaml

@@ -6,12 +6,12 @@ repos:
     -   id: end-of-file-fixer
     -   id: trailing-whitespace
 -   repo: https://github.com/psf/black
-    rev: 23.9.1
+    rev: 23.12.1
     hooks:
     -   id: black
         exclude: ^docs/
 -   repo: https://github.com/pre-commit/mirrors-prettier
-    rev: "v3.0.3"
+    rev: "v4.0.0-alpha.8"
     hooks:
     -   id: prettier
         types_or: [css, javascript]

.storybook/preview-head.html

@@ -1,3 +1,9 @@
 <script>
   window.global = window;
 </script>
+
+<style>
+  :root {
+    font-family: sans-serif;
+  }
+</style>

LICENSE

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) <year> <copyright holders>
+Copyright (c) 2017-2023, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy).  All rights reserved.
 
 Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
 

README.md

@@ -3,18 +3,7 @@
   <h3 align="center">NWB Graphical User Interface for Data Entry</h3>
 </p>
 
-> **Note:** This project is under heavy pre-release development and is not recommended for practical use.
 
-<!-- TABLE OF CONTENTS -->
-
-## Table of Contents
-
-- [About](#about)
-- [Installation](#installation)
-- [Getting Started](#getting-started)
-- [Contributing](#contributing)
-
-## About
 NWB GUIDE is a desktop app that provides a no-code user interface for converting neurophysiology data to NWB.
 
 <p align="center">
@@ -24,82 +13,5 @@ NWB GUIDE is a desktop app that provides a no-code user interface for converting
 </p>
 
 
-
 ## Installation
-
-Begin by downloading the latest release from the [GitHub release page](https://github.com/NeurodataWithoutBorders/nwb-guide/releases).
-
-### Windows
-
-Run the `setup.exe` file and follow all instructions.
-
-### MacOS
-
-Run the `.dmg` file and follow all instructions to move the file into your Applications folder.
-
-### Ubuntu
-
-Please follow the [Developer Instructions](#developer-installation) on the [linux-fix](https://github.com/neurodatawithoutborders/nwb-guide/tree/linux-fix) branch of the NWB GUIDE.
-
-
-
-## Developer Installation
-
-Start by cloning the repository
-
-```
-git clone https://github.com/catalystneuro/nwb-guide
-```
-
-Install the appropriate Python dependencies for your operating system.
-
-### Windows
-```bash
-conda env create -f ./environments/environment-Windows.yml
-```
-
-### Mac
-```bash
-conda env create -f ./environments/environment-MAC.yml
-```
-
-### M1 Mac
-```bash
-conda env create -f ./environments/environment-MAC-arm64.yml
-```
-
-### Linux
-```bash
-conda env create -f ./environments/environment-Linux.yml
-```
-
-## Getting Started
-Before starting NWB GUIDE, you'll need to ensure that the Python environment is activated.
-
-```bash
-conda activate nwb-guide
-```
-
-Next, install all JavaScript dependencies based on the `package-lock.json` file.
-
-```bash
-npm ci
-```
-
-You can now run the following command to start the application using Electron.
-
-```bash
-npm start
-```
-
-## Contributing
-
-### Repo Structure
-#### NWB GUIDE
-1. `/src` - Contains all the source code for the frontend
-    - `index.js` - The entry point for the application
-    - `pages.js` - The main code that controls which pages are rendered and how they are linked together
-    - `stories` - Contains all the Web Components and related Storybook stories
-    - `electron` - Contains all the Electron-related code to enable conditional inclusion for development mode
-    - `assets` - Contains all the frontend-facing assets (e.g. images, css, etc.)
-2. `/pyflask` - Contains all the source code for the backend
+See the installation instructions in our [documentation](https://nwb-guide.readthedocs.io/en/latest/installation.html).

docs/conf_extlinks.py

@@ -1,5 +1,7 @@
 # Use this for mapping to external links
 extlinks = {
+    "linux-fix": ("https://github.com/neurodatawithoutborders/nwb-guide/tree/linux-fix/%s", "%s"),
+    "releases": ("https://github.com/NeurodataWithoutBorders/nwb-guide/releases/%s", "%s"),
     "pynwb-docs": ("https://pynwb.readthedocs.io/en/stable/%s", "%s"),
     "matnwb-src": ("https://github.com/NeurodataWithoutBorders/matnwb/%s", "%s"),
     "nwb-overview": ("https://nwb-overview.readthedocs.io/en/latest/%s", "%s"),