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Quick fix for werkzeug/flask incompatibility #942

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Nov 4, 2024
Merged

Quick fix for werkzeug/flask incompatibility #942

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1 change: 1 addition & 0 deletions environments/environment-Linux.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@ dependencies:
- flask == 2.3.2
- flask-cors == 4.0.0
- flask_restx == 1.1.0
- werkzeug < 3.0 # werkzeug 3.0 deprecates features used by flask 2.3.2. Remove this when updating flask.
# For stability, NeuroConv is pinned at a commit just prior to breaking SpikeInterface compatibility
- neuroconv @ git+https://github.com/catalystneuro/neuroconv.git@fa636458aa5c321f1c2c08f6e682b4a52d5a83f3#neuroconv[dandi,compressors,ecephys,ophys,behavior,text]
# For stability, pinning SpikeInterface to a version that works with NeuroConv and with tutorial generation
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1 change: 1 addition & 0 deletions environments/environment-MAC-apple-silicon.yml
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Expand Up @@ -21,6 +21,7 @@ dependencies:
- flask == 2.3.2
- flask-cors == 4.0.0
- flask_restx == 1.1.0
- werkzeug < 3.0 # werkzeug 3.0 deprecates features used by flask 2.3.2. Remove this when updating flask.
# NOTE: the NeuroConv wheel on PyPI includes sonpy which is not compatible with arm64, so build and install
# NeuroConv from GitHub, which will remove the sonpy dependency when building from Mac arm64
# For stability, NeuroConv is pinned at a commit just prior to breaking SpikeInterface compatibility
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1 change: 1 addition & 0 deletions environments/environment-MAC-intel.yml
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Expand Up @@ -18,6 +18,7 @@ dependencies:
- flask == 2.3.2
- flask-cors == 4.0.0
- flask_restx == 1.1.0
- werkzeug < 3.0 # werkzeug 3.0 deprecates features used by flask 2.3.2. Remove this when updating flask.
# For stability, NeuroConv is pinned at a commit just prior to breaking SpikeInterface compatibility
- neuroconv @ git+https://github.com/catalystneuro/neuroconv.git@fa636458aa5c321f1c2c08f6e682b4a52d5a83f3#neuroconv[dandi,compressors,ecephys,ophys,behavior,text]
# For stability, pinning SpikeInterface to a version that works with NeuroConv and with tutorial generation
Expand Down
1 change: 1 addition & 0 deletions environments/environment-Windows.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -18,6 +18,7 @@ dependencies:
- flask == 2.3.2
- flask-cors === 3.0.10
- flask_restx == 1.1.0
- werkzeug < 3.0 # werkzeug 3.0 deprecates features used by flask 2.3.2. Remove this when updating flask.
# For stability, NeuroConv is pinned at a commit just prior to breaking SpikeInterface compatibility
- neuroconv @ git+https://github.com/catalystneuro/neuroconv.git@fa636458aa5c321f1c2c08f6e682b4a52d5a83f3#neuroconv[dandi,compressors,ecephys,ophys,behavior,text]
# For stability, pinning SpikeInterface to a version that works with NeuroConv and with tutorial generation
Expand Down
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