Merge pull request #3 from NilFoundation/directly-include-parallel-co…

…ntainers

Directly include parallel containers

.gitmodules

@@ -7,9 +7,6 @@
 [submodule "libs/threaded-math"]
 	path = libs/parallel-math
 	url = [email protected]:NilFoundation/actor-math
-[submodule "libs/threaded-containers"]
-	path = libs/parallel-containers
-	url = [email protected]:NilFoundation/actor-containers
 [submodule "cmake/modules"]
 	path = cmake/modules
 	url = [email protected]:BoostCMake/cmake_modules.git

libs/parallel-containers/CMakeLists.txt

@@ -0,0 +1,98 @@
+#---------------------------------------------------------------------------//
+#  MIT License
+#
+#  Copyright (c) 2020 Mikhail Komarov <[email protected]>
+#  Copyright (c) 2021 Aleksei Moskvin <[email protected]>
+#
+#  Permission is hereby granted, free of charge, to any person obtaining a copy
+#  of this software and associated documentation files (the "Software"), to deal
+#  in the Software without restriction, including without limitation the rights
+#  to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+#  copies of the Software, and to permit persons to whom the Software is
+#  furnished to do so, subject to the following conditions:
+#
+#  The above copyright notice and this permission notice shall be included in all
+#  copies or substantial portions of the Software.
+#
+#  THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+#  IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+#  FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+#  AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+#  LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+#  OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+#  SOFTWARE.
+#---------------------------------------------------------------------------//
+
+cmake_minimum_required(VERSION 2.8.12)
+
+cmake_policy(SET CMP0042 NEW)
+cmake_policy(SET CMP0028 NEW)
+cmake_policy(SET CMP0048 NEW)
+cmake_policy(SET CMP0057 NEW)
+cmake_policy(SET CMP0079 OLD)
+
+list(APPEND CMAKE_MODULE_PATH "${CMAKE_CURRENT_LIST_DIR}/cmake"
+        "${CMAKE_CURRENT_LIST_DIR}/cmake/modules/share/modules/cmake")
+
+include(CMConfig)
+include(CMSetupVersion)
+
+cm_workspace(actor)
+
+include(CMDeploy)
+include(CMSetupVersion)
+
+if (NOT Boost_FOUND AND NOT CMAKE_CROSSCOMPILING)
+    find_package(Boost COMPONENTS REQUIRED filesystem)
+endif ()
+
+cm_project(containers WORKSPACE_NAME ${CMAKE_WORKSPACE_NAME})
+
+option(BUILD_DOXYGEN_DOCS "Build with configuring Doxygen documentation compiler" TRUE)
+
+set(DOXYGEN_OUTPUT_DIR "${CMAKE_CURRENT_LIST_DIR}/docs" CACHE STRING "Specify doxygen output directory")
+
+list(APPEND ${CURRENT_PROJECT_NAME}_PUBLIC_HEADERS
+        )
+
+list(APPEND ${CURRENT_PROJECT_NAME}_UNGROUPED_SOURCES)
+
+list(APPEND ${CURRENT_PROJECT_NAME}_HEADERS
+        ${${CURRENT_PROJECT_NAME}_PUBLIC_HEADERS}
+        ${${CURRENT_PROJECT_NAME}_UNGROUPED_SOURCES})
+
+list(APPEND ${CURRENT_PROJECT_NAME}_SOURCES
+        ${${CURRENT_PROJECT_NAME}_UNGROUPED_SOURCES})
+
+cm_setup_version(VERSION 0.1.0 PREFIX ${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME})
+
+add_library(${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME} INTERFACE)
+
+set_target_properties(${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME} PROPERTIES
+        EXPORT_NAME ${CURRENT_PROJECT_NAME})
+
+target_link_libraries(${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME} INTERFACE
+
+        ${CMAKE_WORKSPACE_NAME}::core
+
+        crypto3::algebra
+        crypto3::hash
+
+        ${Boost_LIBRARIES})
+
+target_include_directories(${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME} INTERFACE
+        "$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>"
+        "$<BUILD_INTERFACE:${CMAKE_BINARY_DIR}/include>"
+
+        ${Boost_INCLUDE_DIRS})
+
+cm_deploy(TARGETS ${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME} INCLUDE include NAMESPACE ${CMAKE_WORKSPACE_NAME}::)
+
+if (BUILD_TESTS)
+    add_subdirectory(test)
+endif ()
+
+if (BUILD_EXAMPLES)
+    add_subdirectory(example)
+endif ()
+

libs/parallel-containers/README.md

@@ -0,0 +1,21 @@
+# Containers for =nil; Foundation's Cryptography Suite
+
+Containers using =nil; Foundation's cryptography suite.
+
+## Building
+
+This library uses Boost CMake build modules (https://github.com/BoostCMake/cmake_modules.git).
+To actually include this library in a project it is required to:
+
+1. Add [CMake Modules](https://github.com/BoostCMake/cmake_modules.git) as submodule to target project repository.
+2. Add all the internal dependencies using [CMake Modules](https://github.com/BoostCMake/cmake_modules.git) as submodules to target project repository.
+3. Initialize parent project with [CMake Modules](https://github.com/BoostCMake/cmake_modules.git) (Look at [crypto3](https://github.com/nilfoundation/crypto3.git) for the example)
+
+## Dependencies
+
+### Internal
+
+* [Hash](https://github.com/nilfoundation/crypto3-hash.git).
+
+### External
+* [Boost](https://boost.org) (>= 1.76)

libs/parallel-containers/example/CMakeLists.txt

@@ -0,0 +1,48 @@
+#---------------------------------------------------------------------------//
+#  MIT License
+#
+#  Copyright (c) 2020 Mikhail Komarov <[email protected]>
+#
+#  Permission is hereby granted, free of charge, to any person obtaining a copy
+#  of this software and associated documentation files (the "Software"), to deal
+#  in the Software without restriction, including without limitation the rights
+#  to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+#  copies of the Software, and to permit persons to whom the Software is
+#  furnished to do so, subject to the following conditions:
+#
+#  The above copyright notice and this permission notice shall be included in all
+#  copies or substantial portions of the Software.
+#
+#  THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+#  IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+#  FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+#  AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+#  LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+#  OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+#  SOFTWARE.
+#---------------------------------------------------------------------------//
+
+
+include_directories("${CMAKE_CURRENT_SOURCE_DIR}/../include"
+        "${CMAKE_CURRENT_BINARY_DIR}/include"
+
+        ${Boost_INCLUDE_DIRS})
+
+macro(define_containers_example example)
+    get_filename_component(test_name ${example} NAME)
+    set(target_name ${CMAKE_WORKSPACE_NAME}_${CURRENT_PROJECT_NAME}_${test_name}_example)
+
+    add_executable(${target_name} ${example}.cpp)
+    target_link_libraries(${target_name} PRIVATE
+            ${CMAKE_WORKSPACE_NAME}::algebra
+            ${CMAKE_WORKSPACE_NAME}::hash
+            ${Boost_LIBRARIES})
+    set_target_properties(${target_name} PROPERTIES CXX_STANDARD 17)
+endmacro()
+
+set(EXAMPLES_NAMES
+    "merkle/merkle")
+
+foreach(EXAMPLE_NAME ${EXAMPLES_NAMES})
+    define_containers_example(${EXAMPLE_NAME})
+endforeach()

libs/parallel-containers/example/merkle/merkle.cpp

@@ -0,0 +1,67 @@
+//---------------------------------------------------------------------------//
+// Copyright (c) 2018-2020 Mikhail Komarov <[email protected]>
+// Copyright (c) 2021-2022 Aleksei Moskvin <[email protected]>
+//
+// MIT License
+//
+// Permission is hereby granted, free of charge, to any person obtaining a copy
+// of this software and associated documentation files (the "Software"), to deal
+// in the Software without restriction, including without limitation the rights
+// to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+// copies of the Software, and to permit persons to whom the Software is
+// furnished to do so, subject to the following conditions:
+//
+// The above copyright notice and this permission notice shall be included in all
+// copies or substantial portions of the Software.
+//
+// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+// OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+// SOFTWARE.
+//---------------------------------------------------------------------------//
+
+#include <nil/crypto3/hash/sha2.hpp>
+#include <nil/crypto3/hash/md5.hpp>
+#include <nil/crypto3/hash/blake2b.hpp>
+
+#include <nil/crypto3/container/merkle/tree.hpp>
+#include <nil/crypto3/container/merkle/proof.hpp>
+
+using namespace nil::crypto3;
+using namespace nil::crypto3::containers;
+
+int main() {
+    std::vector<std::array<char, 1> > data_on_leafs = {{'0'}, {'1'}, {'2'}, {'3'}, {'4'}, {'5'}, {'6'}, {'7'}, {'8'}};
+    std::array<char, 1> element_not_in_tree = {'9'};
+    merkle_tree<hashes::blake2b<224>, 3> tree = make_merkle_tree<hashes::blake2b<224>, 3>(data_on_leafs.begin(), data_on_leafs.end());
+    merkle_proof<hashes::blake2b<224>, 3> proof_leaf_3(tree, 3);
+    merkle_proof<hashes::blake2b<224>, 3> proof_leaf_0(tree, 0);
+//    std::cout << "Tree structure:" << std::endl;
+//    std::cout << tree << std::endl;
+    std::vector<std::array<char, 1>> data_to_check = {{data_on_leafs[2]}, {data_on_leafs[0]}, element_not_in_tree};
+    for (size_t i = 0; i < data_to_check.size(); ++i) {
+        std::cout << "Is leaf " << data_to_check[i][0] << " was in tree in position 0: ";
+        std::cout << std::boolalpha << proof_leaf_0.validate(data_to_check[i]) << std::endl;
+        std::cout << "Is leaf " << data_to_check[i][0] << " was in tree in position 3: ";
+        std::cout << std::boolalpha << proof_leaf_3.validate(data_to_check[i]) << std::endl;
+    }
+    std::cout << std::endl;
+
+    std::array<char, 7> left = {'\x6d', '\x65', '\x73', '\x73', '\x61', '\x67', '\x65'};
+    std::array<char, 7> right = {'\x20', '\x64', '\x69', '\x67', '\x65', '\x73', '\x74'};
+    std::vector<std::array<char, 7> > simple_binary_tree_data = {left, right};
+    merkle_tree<hashes::blake2b<224>, 2> simple_binary_tree = make_merkle_tree<hashes::blake2b<224>, 2>(simple_binary_tree_data.begin(), simple_binary_tree_data.end());
+    merkle_proof<hashes::blake2b<224>, 2> simple_binary_proof_leaf_1(simple_binary_tree, 1);
+//    std::cout << "Tree simple binary structure:" << std::endl;
+//    std::cout << simple_binary_tree << std::endl;
+    std::cout << "Is leaf " << data_on_leafs[1][0] << " was in tree in position 1: ";
+    std::cout << std::boolalpha << simple_binary_proof_leaf_1.validate(data_on_leafs[1]) << std::endl;
+    std::cout << "Is leaf left was in tree in position 1: ";
+    std::cout << std::boolalpha << simple_binary_proof_leaf_1.validate(left) << std::endl;
+    std::cout << "Is leaf right was in tree in position 1: ";
+    std::cout << std::boolalpha << simple_binary_proof_leaf_1.validate(right) << std::endl;
+
+}

libs/parallel-containers/include/nil/crypto3/container/accumulation_vector.hpp

@@ -0,0 +1,104 @@
+//---------------------------------------------------------------------------//
+// Copyright (c) 2018-2021 Mikhail Komarov <[email protected]>
+// Copyright (c) 2020-2021 Nikita Kaskov <[email protected]>
+// Copyright (c) 2021 Ilias Khairullin <[email protected]>
+//
+// MIT License
+//
+// Permission is hereby granted, free of charge, to any person obtaining a copy
+// of this software and associated documentation files (the "Software"), to deal
+// in the Software without restriction, including without limitation the rights
+// to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+// copies of the Software, and to permit persons to whom the Software is
+// furnished to do so, subject to the following conditions:
+//
+// The above copyright notice and this permission notice shall be included in all
+// copies or substantial portions of the Software.
+//
+// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+// OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+// SOFTWARE.
+//---------------------------------------------------------------------------//
+
+#ifndef CRYPTO3_ZK_SNARK_ACCUMULATION_VECTOR_HPP
+#define CRYPTO3_ZK_SNARK_ACCUMULATION_VECTOR_HPP
+
+#include <iostream>
+#include <iterator>
+
+#include <nil/crypto3/container/sparse_vector.hpp>
+
+namespace nil {
+    namespace crypto3 {
+        namespace container {
+
+            /**
+             * An accumulation vector comprises an accumulation value and a sparse vector.
+             * The method "accumulate_chunk" allows one to accumulate portions of the sparse
+             * vector into the accumulation value.
+             */
+            template<typename Type>
+            class accumulation_vector {
+                using underlying_value_type = typename Type::value_type;
+
+            public:
+                using group_type = Type;
+
+                underlying_value_type first;
+                sparse_vector<Type> rest;
+
+                accumulation_vector() = default;
+                accumulation_vector(const accumulation_vector<Type> &other) = default;
+                accumulation_vector(accumulation_vector<Type> &&other) = default;
+                accumulation_vector(const underlying_value_type &first, sparse_vector<Type> &&rest) :
+                    first(first), rest(std::move(rest)) {};
+                accumulation_vector(underlying_value_type &&first, sparse_vector<Type> &&rest) :
+                    first(std::move(first)), rest(std::move(rest)) {};
+                accumulation_vector(underlying_value_type &&first, std::vector<underlying_value_type> &&v) :
+                    first(std::move(first)), rest(std::move(v)) {
+                }
+                accumulation_vector(std::vector<underlying_value_type> &&v) :
+                    first(underlying_value_type::zero()), rest(std::move(v)) {};
+
+                accumulation_vector<Type> &operator=(const accumulation_vector<Type> &other) = default;
+                accumulation_vector<Type> &operator=(accumulation_vector<Type> &&other) = default;
+
+                bool operator==(const accumulation_vector<Type> &other) const {
+                    return (this->first == other.first && this->rest == other.rest);
+                }
+
+                bool is_fully_accumulated() const {
+                    return rest.empty();
+                }
+
+                std::size_t domain_size() const {
+                    return rest.domain_size();
+                }
+
+                std::size_t size() const {
+                    return rest.domain_size();
+                }
+
+                std::size_t size_in_bits() const {
+                    const std::size_t first_size_in_bits = Type::value_bits;
+                    const std::size_t rest_size_in_bits = rest.size_in_bits();
+                    return first_size_in_bits + rest_size_in_bits;
+                }
+
+                template<typename InputIterator>
+                accumulation_vector<Type> accumulate_chunk(InputIterator begin, InputIterator end,
+                                                           std::size_t offset) const {
+                    std::pair<underlying_value_type, sparse_vector<Type>> acc_result = rest.insert(offset, begin, end);
+                    underlying_value_type new_first = first + acc_result.first;
+                    return accumulation_vector<Type>(std::move(new_first), std::move(acc_result.second));
+                }
+            };
+        }    // namespace container
+    }        // namespace crypto3
+}    // namespace nil
+
+#endif    // CRYPTO3_ZK_SNARK_ACCUMULATION_VECTOR_HPP