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Update mondo.md
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matentzn authored Dec 2, 2024
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19 changes: 11 additions & 8 deletions ontology/mondo.md
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Expand Up @@ -24,24 +24,28 @@ mailing_list: https://groups.google.com/group/mondo-users
preferredPrefix: MONDO
products:
- id: mondo.owl
title: Main OWL edition
description: Complete ontology. Uses MONDO IDs. Imports merged. The original mondo.owl without merged imports and with equivalence axioms can now be obtained from the release pages and is called mondo-with-equivalents.
title: Mondo OWL edition
description: Complete ontology with merged imports.
format: owl-rdf/xml
is_canonical: true
- id: mondo.obo
title: obo-format edition
title: Mondo OBO Format edition
derived_from: mondo.owl
description: As OWL. xrefs can be used as proxy for equivalence. Uses Mondo IDs.
description: OBO serialization of mondo.owl.
format: obo
- id: mondo.json
title: json edition
title: Mondo JSON edition
derived_from: mondo.owl
description: Equivalent to the OWL edition.
description: Obographs serialization of mondo.owl.
format: obo
- id: mondo/mondo-base.owl
title: Mondo Base Module
title: Mondo Base Release
description: The main ontology plus axioms connecting to select external ontologies, excluding the external ontologies themselves
format: owl
- id: mondo/mondo-simple.owl
title: Mondo Simple Release
description: The main ontology classes and their hierarchies, without references to external terms.
format: owl
publications:
- id: https://www.medrxiv.org/content/10.1101/2022.04.13.22273750
title: 'Mondo: Unifying diseases for the world, by the world'
Expand All @@ -52,7 +56,6 @@ taxon:
id: NCBITaxon:33208
label: Metazoa
tracker: https://github.com/monarch-initiative/mondo/issues
twitter: MonarchInit
usages:
- description: Mondo is used by the Monarch Initiative for disease annotations.
examples:
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